RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
PKP4-206ENST00000452162 ASNSP08243 561 aa12.21□□□□□ -0.45
PKP4-206ENST00000452162 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.45
PKP4-206ENST00000452162 PNOCQ13519 176 aa12.21□□□□□ -0.45
PKP4-206ENST00000452162 NOM1Q5C9Z4 860 aaKnown RBP12.21□□□□□ -0.45
PKP4-206ENST00000452162 ZNF444Q8N0Y2 327 aaPredicted RBP12.21□□□□□ -0.45
PKP4-206ENST00000452162 SPTLC3Q9NUV7 552 aa12.21□□□□□ -0.45
PKP4-206ENST00000452162 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
PKP4-206ENST00000452162 MAD2L2Q9UI95 211 aa12.21□□□□□ -0.45
PKP4-206ENST00000452162 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
PKP4-206ENST00000452162 WNT7AO00755 349 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 ATP2B1P20020 1258 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 ABCB5Q2M3G0 1257 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 CCDC186Q7Z3E2 898 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 CNNM3Q8NE01 707 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 WBP1LQ9NX94 342 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 NRBP1Q9UHY1 535 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 PYCARDQ9ULZ3 195 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.46
PKP4-206ENST00000452162 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
PKP4-206ENST00000452162 BMP15O95972 392 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 AKR1B1P15121 316 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 TM4SF4P48230 202 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 GNAQP50148 359 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 GTF2A2P52657 109 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 MAP2K1Q02750 393 aaPredicted RBP12.2□□□□□ -0.46
PKP4-206ENST00000452162 NCAPHQ15003 741 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 PTPN18Q99952 460 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 TMEM47Q9BQJ4 181 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 CSRNP2Q9H175 543 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 IGF2BP3O00425 579 aaKnown RBP eCLIP12.2□□□□□ -0.46
PKP4-206ENST00000452162 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
PKP4-206ENST00000452162 SPP2Q13103 211 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 NOLC1Q14978 699 aaKnown RBP eCLIP12.2□□□□□ -0.46
PKP4-206ENST00000452162 CCL15Q16663 113 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 DRC7Q8IY82 874 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 SH3GLB2Q9NR46 395 aa12.2□□□□□ -0.46
PKP4-206ENST00000452162 GREB1LQ9C091 1923 aaPredicted RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 PALM3A6NDB9 673 aaPredicted RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 IKBKBO14920 756 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 ADAMTS3O15072 1205 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 FOXN1O15353 648 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 NOVP48745 357 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 NLRP5P59047 1200 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 SNAPC2Q13487 334 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 SEPT2Q15019 361 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 POLR2DO15514 142 aaKnown RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 CALML3P27482 149 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 DGKZQ13574 1117 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 ZNF280CQ8ND82 737 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 FERMT2Q96AC1 680 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 GINM1Q9NU53 330 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 SERTAD1Q9UHV2 236 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 PCDHA5Q9Y5H7 936 aa12.19□□□□□ -0.46
PKP4-206ENST00000452162 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
PKP4-206ENST00000452162 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 CXCL11O14625 94 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 CYTH3O43739 400 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 CETPP11597 493 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 TERF1P54274 439 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 INHBEP58166 350 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
PKP4-206ENST00000452162 MOGSQ13724 837 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 POSTNQ15063 836 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 NT5DC1Q5TFE4 455 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 ISM2Q6H9L7 571 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
PKP4-206ENST00000452162 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 HOOK1Q9UJC3 728 aaKnown RBP12.18□□□□□ -0.46
PKP4-206ENST00000452162 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 A0A0G2JLL6 359 aaPredicted RBP12.18□□□□□ -0.46
PKP4-206ENST00000452162 SMTNL1A8MU46 457 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 TRPA1O75762 1119 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 ZNF174Q15697 407 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 PIK3AP1Q6ZUJ8 805 aa12.18□□□□□ -0.46
PKP4-206ENST00000452162 PRRT2Q7Z6L0 340 aaPredicted RBP12.18□□□□□ -0.46
PKP4-206ENST00000452162 GPKOWQ92917 476 aaPredicted RBP eCLIP12.18□□□□□ -0.46
PKP4-206ENST00000452162 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms