RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 FBXO28Q9NVF7 368 aa9.42□□□□□ -0.9
NECAP1-202ENST00000450991 ZNF112Q9UJU3 913 aa9.42□□□□□ -0.9
NECAP1-202ENST00000450991 OTOFQ9HC10 1997 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-202ENST00000450991 SPP2Q13103 211 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 PTGDRQ13258 359 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 KRT25Q7Z3Z0 450 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 COL11A1P12107 1806 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-202ENST00000450991 PTPRAP18433 802 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 FMR1Q06787 632 aaKnown RBP eCLIP9.41□□□□□ -0.9
NECAP1-202ENST00000450991 USH1GQ495M9 461 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 SPECC1Q5M775 1068 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 SASS6Q6UVJ0 657 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 BTNL9Q6UXG8 535 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 ZNF526Q8TF50 670 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-202ENST00000450991 HOOK2Q96ED9 719 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 CDCA5Q96FF9 252 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 SH2D4AQ9H788 454 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 PTPRFP10586 1907 aa9.41□□□□□ -0.9
NECAP1-202ENST00000450991 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
NECAP1-202ENST00000450991 RLFQ13129 1914 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 IQCA1LA6NCM1 817 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 MCM7P33993 719 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 ADCY7P51828 1080 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 STAT2P52630 851 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 UBE2SQ16763 222 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 INF2Q27J81 1249 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 ANO6Q4KMQ2 910 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 JAKMIP3Q5VZ66 844 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 CCDC174Q6PII3 467 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
NECAP1-202ENST00000450991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.9
NECAP1-202ENST00000450991 PPP1R9BQ96SB3 815 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 SDF4Q9BRK5 362 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 RIC8AQ9NPQ8 531 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 TMEM260Q9NX78 707 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-202ENST00000450991 PRR12Q9ULL5 1215 aa9.4□□□□□ -0.9
NECAP1-202ENST00000450991 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 VGLL4Q14135 290 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 NONOQ15233 471 aaKnown RBP eCLIP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 IL17AQ16552 155 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 MAP1SQ66K74 1059 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 ARL6IP4Q66PJ3 421 aaKnown RBP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 USP49Q70CQ1 688 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 ELOA2Q8IYF1 753 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-202ENST00000450991 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 EMILIN3Q9NT22 766 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 PCDHA1Q9Y5I3 950 aa9.4□□□□□ -0.91
NECAP1-202ENST00000450991 TRAF5O00463 557 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 HMGCS2P54868 508 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 CCDC173Q0VFZ6 552 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 LONRF3Q496Y0 759 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 KRBA2Q6ZNG9 492 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-202ENST00000450991 PDLIM2Q96JY6 352 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 ZMYND15Q9H091 742 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 KIAA1683Q9H0B3 1180 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 RRAGCQ9HB90 399 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 KIAA1468Q9P260 1216 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 PPP1R12BO60237 982 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-202ENST00000450991 VCAM1P19320 739 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 STX1AQ16623 288 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
NECAP1-202ENST00000450991 CLMNQ96JQ2 1002 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 SNCAIPQ9Y6H5 919 aa9.39□□□□□ -0.91
NECAP1-202ENST00000450991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 VWA3AA6NCI4 1184 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 POLR2DO15514 142 aaKnown RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 EDIL3O43854 480 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 CAVIN2O95810 425 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 BACE1P56817 501 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 ORC2Q13416 577 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 NEK8Q86SG6 692 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 SYMPKQ92797 1274 aaKnown RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 CUL5Q93034 780 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 EPSTI1Q96J88 318 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 TMEM60Q9H2L4 133 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 RPAP3Q9H6T3 665 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-202ENST00000450991 ELP3Q9H9T3 547 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 CBX8Q9HC52 389 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 GINM1Q9NU53 330 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms