RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MSL3Q8N5Y2 521 aaKnown RBP9.73□□□□□ -0.85
LINC01961-201ENST00000449954 POP1Q99575 1024 aaKnown RBP9.73□□□□□ -0.85
LINC01961-201ENST00000449954 ADAMTS8Q9UP79 889 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 DNAH14Q0VDD8 3507 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 VPS13AQ96RL7 3174 aa9.73□□□□□ -0.85
LINC01961-201ENST00000449954 PROB1E7EW31 1015 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 APAF1O14727 1248 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 KRT37O76014 449 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 GH2P01242 217 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
LINC01961-201ENST00000449954 C6orf222P0C671 652 aaPredicted RBP9.72□□□□□ -0.85
LINC01961-201ENST00000449954 TAL1P17542 331 aaPredicted RBP9.72□□□□□ -0.85
LINC01961-201ENST00000449954 CCL23P55773 120 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 COG2Q14746 738 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 ANKRD44Q8N8A2 993 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 KLHDC4Q8TBB5 520 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 NOC4LQ9BVI4 516 aaKnown RBP9.72□□□□□ -0.85
LINC01961-201ENST00000449954 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 WNT8AQ9H1J5 351 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 TECTAO75443 2155 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 UMODL1Q5DID0 1318 aa9.72□□□□□ -0.85
LINC01961-201ENST00000449954 MYADML2A6NDP7 307 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 SLC25A27O95847 323 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 HLA-DOAP06340 250 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 FUT2Q10981 343 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 TTLL4Q14679 1199 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 CCDC102BQ68D86 513 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 HERC6Q8IVU3 1022 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 SLC43A3Q8NBI5 491 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 GDPD5Q8WTR4 605 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 ATOH1Q92858 354 aaPredicted RBP9.71□□□□□ -0.86
LINC01961-201ENST00000449954 NOL10Q9BSC4 688 aaKnown RBP9.71□□□□□ -0.86
LINC01961-201ENST00000449954 UPF3AQ9H1J1 476 aaKnown RBP9.71□□□□□ -0.86
LINC01961-201ENST00000449954 FAM86C1Q9NVL1 165 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 CHD8Q9HCK8 2581 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 GVINP1Q7Z2Y8 2422 aa9.71□□□□□ -0.86
LINC01961-201ENST00000449954 KMT2EQ8IZD2 1858 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 CABYRO75952 493 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 IRS1P35568 1242 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 GJA9P57773 515 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 PLS1Q14651 629 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 KCTD2Q14681 263 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 ZNF792Q3KQV3 632 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 ZNF384Q8TF68 577 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 EDAQ92838 391 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 PBXIP1Q96AQ6 731 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
LINC01961-201ENST00000449954 MMP19Q99542 508 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 SIL1Q9H173 461 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 FLT1P17948 1338 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 CFAP47Q6ZTR5 3102 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 COL11A1P12107 1806 aaPredicted RBP9.7□□□□□ -0.86
LINC01961-201ENST00000449954 FOCADQ5VW36 1801 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 PLXNA3P51805 1871 aa9.7□□□□□ -0.86
LINC01961-201ENST00000449954 CIAO1O76071 339 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 S1PR4O95977 384 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 RFC2P35250 354 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 RAB3GAP1Q15042 981 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 GNASQ5JWF2 1037 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 SLC4A10Q6U841 1118 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 ATG9AQ7Z3C6 839 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 FBXL6Q8N531 539 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 VWCEQ96DN2 955 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 TANGO6Q9C0B7 1094 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 MUTYHQ9UIF7 546 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 ZHX1Q9UKY1 873 aaPredicted RBP9.69□□□□□ -0.86
LINC01961-201ENST00000449954 DMXL1Q9Y485 3027 aa9.69□□□□□ -0.86
LINC01961-201ENST00000449954 ZNFX1Q9P2E3 1918 aaKnown RBP9.68□□□□□ -0.86
LINC01961-201ENST00000449954 TNKSO95271 1327 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 PRR23AA6NEV1 266 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 TMEM221A6NGB7 291 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 H3BQ06 376 aaPredicted RBP9.68□□□□□ -0.86
LINC01961-201ENST00000449954 M0R296 226 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 BAIAP3O94812 1187 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 BAG3O95817 575 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 ADH1BP00325 375 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 PGK2P07205 417 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 COPB2P35606 906 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 NKX3-2P78367 333 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 TATDN1Q6P1N9 297 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 ASCL5Q7RTU5 278 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 SH3RF3Q8TEJ3 882 aaPredicted RBP9.68□□□□□ -0.86
LINC01961-201ENST00000449954 SCLYQ96I15 445 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 CTNNA3Q9UI47 895 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 NCOR2Q9Y618 2525 aa9.68□□□□□ -0.86
LINC01961-201ENST00000449954 TPRP12270 2363 aaKnown RBP9.68□□□□□ -0.86
LINC01961-201ENST00000449954 IL16Q14005 1332 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 B4GALT4O60513 344 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 ITGA7Q13683 1181 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 TIGD5Q53EQ6 642 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 MAMDC4Q6UXC1 1216 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 MAPKAPK5Q8IW41 473 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 ACER1Q8TDN7 264 aa9.67□□□□□ -0.86
LINC01961-201ENST00000449954 PABPC5Q96DU9 382 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms