RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 ACAD9Q9H845 621 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 TRANK1O15050 2925 aa16.39■□□□□ 0.21
CPSF7-207ENST00000449811 ASB14A6NK59 587 aa16.38■□□□□ 0.21
CPSF7-207ENST00000449811 TLL1O43897 1013 aa16.38■□□□□ 0.21
CPSF7-207ENST00000449811 SMPD1P17405 629 aa16.38■□□□□ 0.21
CPSF7-207ENST00000449811 PTGS1P23219 599 aa16.38■□□□□ 0.21
CPSF7-207ENST00000449811 STK11IPQ8N1F8 1099 aa16.38■□□□□ 0.21
CPSF7-207ENST00000449811 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-207ENST00000449811 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
CPSF7-207ENST00000449811 SOWAHBA6NEL2 793 aa16.37■□□□□ 0.21
CPSF7-207ENST00000449811 EPOPA6NHQ4 379 aa16.37■□□□□ 0.21
CPSF7-207ENST00000449811 KRT40Q6A162 431 aa16.37■□□□□ 0.21
CPSF7-207ENST00000449811 DEFB128Q7Z7B8 93 aa16.37■□□□□ 0.21
CPSF7-207ENST00000449811 PUS7LQ9H0K6 701 aaKnown RBP16.37■□□□□ 0.21
CPSF7-207ENST00000449811 A1CFQ9NQ94 594 aaKnown RBP16.37■□□□□ 0.21
CPSF7-207ENST00000449811 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
CPSF7-207ENST00000449811 LRRC37A2A6NM11 1700 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 GPR37L1O60883 481 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 ACTN1P12814 892 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 ATP5JP18859 108 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 ARNTL2Q8WYA1 636 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 HLA-CQ95604 372 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 HAUS7Q99871 368 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 PDGFCQ9NRA1 345 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 Q9Y3F1 56 aa16.36■□□□□ 0.21
CPSF7-207ENST00000449811 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 FDX1P10109 184 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 CYP2C9P11712 490 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 TAP1Q03518 808 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 IQSEC1Q6DN90 963 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 ZSCAN25Q6NSZ9 544 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 EEPD1Q7L9B9 569 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 FBXO16Q8IX29 292 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-207ENST00000449811 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 MKL1Q969V6 931 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 SLC9A7Q96T83 725 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 C11orf16Q9NQ32 467 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 TRMT13Q9NUP7 481 aaKnown RBP16.35■□□□□ 0.21
CPSF7-207ENST00000449811 SYNPO2Q9UMS6 1093 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
CPSF7-207ENST00000449811 TNKSO95271 1327 aa16.35■□□□□ 0.21
CPSF7-207ENST00000449811 FAM86C2PA6NEL3 165 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 BMP3P12645 472 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 TMEM63BQ5T3F8 832 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 TAPT1Q6NXT6 567 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-207ENST00000449811 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
CPSF7-207ENST00000449811 PHOSPHO2Q8TCD6 241 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.21
CPSF7-207ENST00000449811 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
CPSF7-207ENST00000449811 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
CPSF7-207ENST00000449811 KIF28PB7ZC32 967 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 ARHGEF15O94989 841 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 TTLL1O95922 423 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 STAT2P52630 851 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 GIMAP6Q6P9H5 292 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 ZNF444Q8N0Y2 327 aaPredicted RBP16.33■□□□□ 0.2
CPSF7-207ENST00000449811 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
CPSF7-207ENST00000449811 MTMR4Q9NYA4 1195 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 ZNF536O15090 1300 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
CPSF7-207ENST00000449811 GSG1L2A8MUP6 293 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 PRDM1O75626 825 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 ALAS1P13196 640 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 RFC2P35250 354 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 GRB10Q13322 594 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 HERC6Q8IVU3 1022 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 VTA1Q9NP79 307 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
CPSF7-207ENST00000449811 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 RAB11FIP3O75154 756 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 HMMRO75330 724 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
CPSF7-207ENST00000449811 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-207ENST00000449811 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 CHURC1Q8WUH1 139 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 FTOQ9C0B1 505 aaKnown RBP eCLIP16.31■□□□□ 0.2
CPSF7-207ENST00000449811 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 MYH7P12883 1935 aa16.31■□□□□ 0.2
CPSF7-207ENST00000449811 LPXNO60711 386 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 MYL3P08590 195 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 MUM1L1Q5H9M0 696 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 FAM47CQ5HY64 1035 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
CPSF7-207ENST00000449811 RETREG2Q8NC44 543 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
CPSF7-207ENST00000449811 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms