RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SESTD1Q86VW0 696 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 LMBRD1Q9NUN5 540 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 USP17L3A6NCW0 530 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 USP17L4A6NCW7 530 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 ADAM9Q13443 819 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 SCYL2Q6P3W7 929 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 KRBA2Q6ZNG9 492 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 MAP4K1Q92918 833 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 RAB17Q9H0T7 212 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 CUEDC2Q9H467 287 aa11.21□□□□□ -0.62
SCN10A-201ENST00000449082 RAD17O75943 681 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 BMP3P12645 472 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 POLR2BP30876 1174 aaKnown RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 MTMR3Q13615 1198 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 KCTD1Q719H9 257 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 POMGNT1Q8WZA1 660 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 HAUS1Q96CS2 278 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 ANKFY1Q9P2R3 1169 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 PI4KBQ9UBF8 816 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 SHROOM2Q13796 1616 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 M0R2C6 588 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 CCND2P30279 289 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 CDHR1Q96JP9 859 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 CFAP57Q96MR6 1250 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 ARAP3Q8WWN8 1544 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 PIGBQ92521 554 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 CARD6Q9BX69 1037 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 CYP4A11Q02928 519 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 ABI1Q8IZP0 508 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 AFAP1L1Q8TED9 768 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 MAGI3Q5TCQ9 1506 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 GDF11O95390 407 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 PIK3CAP42336 1068 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 STAT2P52630 851 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 EP400NLQ6ZTU2 488 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 XPO4Q9C0E2 1151 aaKnown RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 LSG1Q9H089 658 aaKnown RBP11.2□□□□□ -0.62
SCN10A-201ENST00000449082 SLC39A2Q9NP94 309 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
SCN10A-201ENST00000449082 ABCB4P21439 1286 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 LACTBP83111 547 aaPredicted RBP11.19□□□□□ -0.62
SCN10A-201ENST00000449082 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 PSMB7Q99436 277 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 AKT3Q9Y243 479 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
SCN10A-201ENST00000449082 AFG3L2Q9Y4W6 797 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 A6NNZ2 444 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 SCRN1Q12765 414 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 TUBB8Q3ZCM7 444 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 SEPT14Q6ZU15 432 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 SLC7A3Q8WY07 619 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 COA1Q9GZY4 146 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 GAP43P17677 238 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 TRIM58Q8NG06 486 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 GRK7Q8WTQ7 553 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 CCDC127Q96BQ5 260 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 AK8Q96MA6 479 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
SCN10A-201ENST00000449082 TBC1D8O95759 1140 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 KCNQ4P56696 695 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 PPM1KQ8N3J5 372 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 ATP2A3Q93084 1043 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 SOS2Q07890 1332 aaPredicted RBP11.19□□□□□ -0.62
SCN10A-201ENST00000449082 TARBP1Q13395 1621 aaKnown RBP11.19□□□□□ -0.62
SCN10A-201ENST00000449082 ABCD1P33897 745 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 SYDE2Q5VT97 1194 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
SCN10A-201ENST00000449082 I3L4J1 428 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 RBM6P78332 1123 aaKnown RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 MICALL1Q8N3F8 863 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 P3H4Q92791 437 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 STMN2Q93045 179 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 ZBTB9Q96C00 473 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 ZNF335Q9H4Z2 1342 aaPredicted RBP11.18□□□□□ -0.62
SCN10A-201ENST00000449082 RGS12O14924 1447 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 KRT15P19012 456 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 PPP2R5CQ13362 524 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 PPP2R5EQ16537 467 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 FBXO18Q8NFZ0 1043 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 ZWINTO95229 277 aa11.18□□□□□ -0.62
SCN10A-201ENST00000449082 ADKP55263 362 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms