RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 VAT1LQ9HCJ6 419 aa20.5■□□□□ 0.87
HLCS-205ENST00000448340 ZNF536O15090 1300 aa20.5■□□□□ 0.87
HLCS-205ENST00000448340 CYTH3O43739 400 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 PLEKHA8P1O95397 391 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 ICAM1P05362 532 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 MAPK4P31152 587 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 SNAP25P60880 206 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 CDC37Q16543 378 aaPredicted RBP20.49■□□□□ 0.87
HLCS-205ENST00000448340 SLC35G1Q2M3R5 365 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 SNRNP48Q6IEG0 339 aaKnown RBP20.49■□□□□ 0.87
HLCS-205ENST00000448340 CCDC174Q6PII3 467 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 SRBD1Q8N5C6 995 aaKnown RBP20.49■□□□□ 0.87
HLCS-205ENST00000448340 DEFB118Q96PH6 123 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 PORCNQ9H237 461 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 FAM217BQ9NTX9 383 aaPredicted RBP20.49■□□□□ 0.87
HLCS-205ENST00000448340 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
HLCS-205ENST00000448340 BAZ2BQ9UIF8 2168 aaKnown RBP20.48■□□□□ 0.87
HLCS-205ENST00000448340 MGAMO43451 1857 aa20.48■□□□□ 0.87
HLCS-205ENST00000448340 CDC27P30260 824 aa20.48■□□□□ 0.87
HLCS-205ENST00000448340 MROH8Q9H579 483 aa20.48■□□□□ 0.87
HLCS-205ENST00000448340 A0A0C4DFX4 3053 aa20.48■□□□□ 0.87
HLCS-205ENST00000448340 ZBTB5O15062 677 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 ST18O60284 1047 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 EVI5O60447 810 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 TFRCP02786 760 aaKnown RBP20.47■□□□□ 0.87
HLCS-205ENST00000448340 ERCC3P19447 782 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 ADD1P35611 737 aaKnown RBP20.47■□□□□ 0.87
HLCS-205ENST00000448340 TKFCQ3LXA3 575 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 NCAPG2Q86XI2 1143 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
HLCS-205ENST00000448340 TNPO2O14787 897 aaKnown RBP20.46■□□□□ 0.87
HLCS-205ENST00000448340 CCT2P78371 535 aaKnown RBP20.46■□□□□ 0.87
HLCS-205ENST00000448340 QRICH1Q2TAL8 776 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
HLCS-205ENST00000448340 LRCH3Q96II8 777 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 PIGSQ96S52 555 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
HLCS-205ENST00000448340 CWC22Q9HCG8 908 aaKnown RBP20.46■□□□□ 0.87
HLCS-205ENST00000448340 CCPG1Q9ULG6 757 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 LIMCH1Q9UPQ0 1083 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 RIPK3Q9Y572 518 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 MYH6P13533 1939 aa20.46■□□□□ 0.87
HLCS-205ENST00000448340 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 PFKFB2O60825 505 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 SLC4A3P48751 1232 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 FUT2Q10981 343 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 STK3Q13188 491 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
HLCS-205ENST00000448340 GPR142Q7Z601 462 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 PLEKHH3Q7Z736 793 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 CCDC82Q8N4S0 544 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 CHST13Q8NET6 341 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 COA7Q96BR5 231 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 RRP36Q96EU6 259 aaKnown RBP20.45■□□□□ 0.86
HLCS-205ENST00000448340 PAWRQ96IZ0 340 aaKnown RBP20.45■□□□□ 0.86
HLCS-205ENST00000448340 FBXO40Q9UH90 709 aa20.45■□□□□ 0.86
HLCS-205ENST00000448340 STRNO43815 780 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 ALAS1P13196 640 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 TRAF1Q13077 416 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 ME3Q16798 604 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 WDR78Q5VTH9 848 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 FBXO11Q86XK2 927 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 HOMER1Q86YM7 354 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 SLC17A8Q8NDX2 589 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 DIS3LQ8TF46 1054 aaKnown RBP20.44■□□□□ 0.86
HLCS-205ENST00000448340 GDF15Q99988 308 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 AMNQ9BXJ7 453 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 NCOA5Q9HCD5 579 aaKnown RBP20.44■□□□□ 0.86
HLCS-205ENST00000448340 SEC63Q9UGP8 760 aaKnown RBP20.44■□□□□ 0.86
HLCS-205ENST00000448340 GJD2Q9UKL4 321 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 CNTNAP5Q8WYK1 1306 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 DOCK3Q8IZD9 2030 aa20.44■□□□□ 0.86
HLCS-205ENST00000448340 SMCHD1A6NHR9 2005 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 DLL1O00548 723 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 PTPREP23469 700 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 MNX1P50219 401 aaPredicted RBP20.43■□□□□ 0.86
HLCS-205ENST00000448340 SCRN1Q12765 414 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 NTRK3Q16288 839 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 CPLX2Q6PUV4 134 aaKnown RBP20.43■□□□□ 0.86
HLCS-205ENST00000448340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.43■□□□□ 0.86
HLCS-205ENST00000448340 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
HLCS-205ENST00000448340 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 RNF146Q9NTX7 359 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 IVNS1ABPQ9Y6Y0 642 aa20.43■□□□□ 0.86
HLCS-205ENST00000448340 CPLX1O14810 134 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 FCER1AP12319 257 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 IFNAR1P17181 557 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 BMP8BP34820 402 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 MCM2P49736 904 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 ABRAQ8N0Z2 381 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 PIBF1Q8WXW3 757 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.42■□□□□ 0.86
HLCS-205ENST00000448340 ACAD9Q9H845 621 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 HOMER2Q9NSB8 354 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 ABCB11O95342 1321 aa20.42■□□□□ 0.86
HLCS-205ENST00000448340 SLC15A5A6NIM6 579 aa20.41■□□□□ 0.86
HLCS-205ENST00000448340 PPP1R11O60927 126 aaPredicted RBP20.41■□□□□ 0.86
HLCS-205ENST00000448340 LARGE1O95461 756 aa20.41■□□□□ 0.86
HLCS-205ENST00000448340 GRB14Q14449 540 aa20.41■□□□□ 0.86
HLCS-205ENST00000448340 USH1GQ495M9 461 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms