RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 USP14P54578 494 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 BZW1Q7L1Q6 419 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 TUBGCP5Q96RT8 1024 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ZNF652Q9Y2D9 606 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MYH13Q9UKX3 1938 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RASGRF2O14827 1237 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RNMTO43148 476 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 ASAP2O43150 1006 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 DCTN3O75935 186 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 GNAI2P04899 355 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 TNFRSF8P28908 595 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MPP3Q13368 585 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 BOLA3Q53S33 107 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 FSIP1Q8NA03 581 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 INO80Q9ULG1 1556 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 H3BNX3 289 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 TSPAN9O75954 239 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PPARGP37231 505 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 TNNI2P48788 182 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 DR1Q01658 176 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SULT2A1Q06520 285 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 LRMPQ12912 555 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 R3HDM1Q15032 1099 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 MIS18BP1Q6P0N0 1132 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SNX29Q8TEQ0 813 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CCDC138Q96M89 665 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 USP40Q9NVE5 1235 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 IFNKQ9P0W0 207 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 EPS15L1Q9UBC2 864 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 BIN2Q9UBW5 565 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 GPC6Q9Y625 555 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 SQORQ9Y6N5 450 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 NPATQ14207 1427 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 KDM5CP41229 1560 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MTTPP55157 894 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 FANCCQ00597 558 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PARP6Q2NL67 630 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CDKL2Q92772 493 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 EPAS1Q99814 870 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SH3GL2Q99962 352 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 FTOQ9C0B1 505 aaKnown RBP eCLIP3.19□□□□□ -1.9
CHD9-203ENST00000447540 ABCB6Q9NP58 842 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 DNAJB4Q9UDY4 337 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 DNAJC12Q9UKB3 198 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ANXA13P27216 316 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 NAA35Q5VZE5 725 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 FBXW10Q5XX13 1052 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ZNF554Q86TJ5 538 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SKAP1Q86WV1 359 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 AFAP1L2Q8N4X5 818 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CHMP6Q96FZ7 201 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RCOR1Q9UKL0 485 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MAN1A2O60476 641 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ANP32DO95626 131 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 STAMBPO95630 424 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PSMA4P25789 261 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 S100A5P33763 92 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 STX3Q13277 289 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 HLTFQ14527 1009 aaKnown RBP eCLIP3.19□□□□□ -1.93e-7■■□□□ 11.9
CHD9-203ENST00000447540 C6orf118Q5T5N4 469 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MREGQ8N565 214 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CALML6Q8TD86 181 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 RMDN1Q96DB5 314 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ACSBG1Q96GR2 724 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 SLC38A10Q9HBR0 1119 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ZCCHC17Q9NP64 241 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 FAM114A2Q9NRY5 505 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PTTG2Q9NZH5 202 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 R3HDM2Q9Y2K5 976 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 BZW2Q9Y6E2 419 aaKnown RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 TTC21BQ7Z4L5 1316 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PDE5AO76074 875 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 TRIM27P14373 513 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MAP3K7CLP57077 242 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 DLG4P78352 724 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 OCRLQ01968 901 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ZNF569Q5MCW4 686 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ANO1Q5XXA6 986 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CDCA2Q69YH5 1023 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 MIGA1Q8NAN2 632 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MYCBPAPQ8TBZ2 947 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ATP6V1G3Q96LB4 118 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 GIT1Q9Y2X7 761 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PRDM15P57071 1507 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 PASKQ96RG2 1323 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 AP1G2O75843 785 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PAX3P23760 479 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MATR3P43243 847 aaKnown RBP eCLIP3.19□□□□□ -1.96e-7■■■□□ 15.5
CHD9-203ENST00000447540 NLRP12P59046 1061 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 E2F5Q15329 346 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 CCDC14Q49A88 953 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 ZNF394Q53GI3 561 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 OTUD5Q96G74 571 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 GPCPD1Q9NPB8 672 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 STAG3Q9UJ98 1225 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 MTMR6Q9Y217 621 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 PALM3A6NDB9 673 aaPredicted RBP3.19□□□□□ -1.9
CHD9-203ENST00000447540 ZNF839A8K0R7 811 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 HOXC8P31273 242 aa3.19□□□□□ -1.9
CHD9-203ENST00000447540 HSPA13P48723 471 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 287.7 ms