RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 UBAP2LQ14157 1087 aaKnown RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 LEXMQ3ZCV2 418 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 C4orf17Q53FE4 359 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 MFSD14CQ5VZR4 134 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 KANK3Q6NY19 840 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PSRC1Q6PGN9 363 aaPredicted RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 CCDC174Q6PII3 467 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 ZNF365Q70YC5 407 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 GPR142Q7Z601 462 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 SLC44A5Q8NCS7 719 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 TEKT1Q969V4 418 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 FERMT2Q96AC1 680 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 GPAMQ9HCL2 828 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PICK1Q9NRD5 415 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 TMEM39AQ9NV64 488 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 CWC25Q9NXE8 425 aaPredicted RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 PHF24Q9UPV7 400 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 ANKRD11Q6UB99 2663 aaPredicted RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 DOCK2Q92608 1830 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 SETXQ7Z333 2677 aaKnown RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 USP24Q9UPU5 2620 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PEX10O60683 326 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 TAF5LO75529 589 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 HOXC6P09630 235 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 IL9P15248 144 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 LRRC41Q15345 812 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 TMEM214Q6NUQ4 689 aaKnown RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 RNF135Q8IUD6 432 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PORCNQ9H237 461 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PCDHA11Q9Y5I1 949 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 MAP1BP46821 2468 aaKnown RBP4.2□□□□□ -1.74
PMS1-215ENST00000447232 ZNF292O60281 2723 aa4.2□□□□□ -1.74
PMS1-215ENST00000447232 PRR23AA6NEV1 266 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 PQBP1O60828 265 aaKnown RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 MYOGP15173 224 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CSF2RAP15509 400 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CNGA1P29973 690 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 PABPC4Q13310 644 aaKnown RBP eCLIP4.19□□□□□ -1.74
PMS1-215ENST00000447232 ACAP1Q15027 740 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 PKN1Q16512 942 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 KRT24Q2M2I5 525 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CC2D1BQ5T0F9 858 aaKnown RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 GPRC5AQ8NFJ5 357 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 MPHOSPH8Q99549 860 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 MYD88Q99836 296 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 HYPKQ9NX55 129 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 NUDCQ9Y266 331 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 VPS13AQ96RL7 3174 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CNTNAP5Q8WYK1 1306 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 GPR179Q6PRD1 2367 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 COL4A4P53420 1690 aaPredicted RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 LPXNO60711 386 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CTNND1O60716 968 aaKnown RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 ACRP10323 421 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CYP2C19P33261 490 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 ABL2P42684 1182 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 RABGGTBP53611 331 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 NFIAQ12857 509 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 OXLD1Q5BKU9 147 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 GNASQ5JWF2 1037 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 PLEKHH3Q7Z736 793 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 CCDC84Q86UT8 332 aaPredicted RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 EDC3Q96F86 508 aaKnown RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 IRF2BPLQ9H1B7 796 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 UBE2ZQ9H832 354 aaPredicted RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 RBPJLQ9UBG7 517 aa4.19□□□□□ -1.74
PMS1-215ENST00000447232 DNMT3AQ9Y6K1 912 aaPredicted RBP4.19□□□□□ -1.74
PMS1-215ENST00000447232 SEPT4O43236 478 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 HOXB7P09629 217 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 MSX1P28360 303 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 ZP2Q05996 745 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 TCP10Q12799 353 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 NFE2L2Q16236 605 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 EPHA10Q5JZY3 1008 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 HDGFL1Q5TGJ6 251 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 HHIPL2Q6UWX4 724 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 RHBDD1Q8TEB9 315 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 PLEKHF1Q96S99 279 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 RUBCNLQ9H714 662 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 IGSF5Q9NSI5 407 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 FAM208BQ5VWN6 2430 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 A0A1W2PQ45 241 aaPredicted RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 A0A1W2PQY0 241 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 OIP5O43482 229 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 CSF1RP07333 972 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 HOXA7P31268 230 aaPredicted RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 HMGCS2P54868 508 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 HERVK_113P62684 666 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 ERVK-24P63145 666 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 MCM6Q14566 821 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 MAP7D1Q3KQU3 841 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 HERC4Q5GLZ8 1057 aaPredicted RBP4.18□□□□□ -1.74
PMS1-215ENST00000447232 ANO1Q5XXA6 986 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 ZFPM1Q8IX07 1006 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 NEDD1Q8NHV4 660 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 NPLOC4Q8TAT6 608 aa4.18□□□□□ -1.74
PMS1-215ENST00000447232 ATOH1Q92858 354 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms