RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 NAPBQ9H115 298 aa28.95■■■□□ 2.22
PMS1-214ENST00000446877 HIPK3Q9H422 1215 aa28.95■■■□□ 2.22
PMS1-214ENST00000446877 MYH7P12883 1935 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 SOWAHBA6NEL2 793 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 TNFRSF10AO00220 468 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 DYNC1LI2O43237 492 aaPredicted RBP28.94■■■□□ 2.22
PMS1-214ENST00000446877 ALAS1P13196 640 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 MCCP23508 829 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 ITGA7Q13683 1181 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 TLK2Q86UE8 772 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 SLC43A3Q8NBI5 491 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 ATXN2LQ8WWM7 1075 aaKnown RBP28.94■■■□□ 2.22
PMS1-214ENST00000446877 CHMP4CQ96CF2 233 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 DCTPP1Q9H773 170 aa28.94■■■□□ 2.22
PMS1-214ENST00000446877 PLIN4Q96Q06 1357 aa28.93■■■□□ 2.22
PMS1-214ENST00000446877 GNEQ9Y223 722 aaKnown RBP28.93■■■□□ 2.22
PMS1-214ENST00000446877 PPARAQ07869 468 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 C20orf194Q5TEA3 1177 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 IQSEC1Q6DN90 963 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 SLC28A3Q9HAS3 691 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 STX8Q9UNK0 236 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 ASTN1O14525 1302 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 ZNF536O15090 1300 aa28.92■■■□□ 2.22
PMS1-214ENST00000446877 IGFBP4P22692 258 aa28.91■■■□□ 2.22
PMS1-214ENST00000446877 DIEXFQ68CQ4 756 aaKnown RBP28.91■■■□□ 2.22
PMS1-214ENST00000446877 CXXC1Q9P0U4 656 aaPredicted RBP28.91■■■□□ 2.22
PMS1-214ENST00000446877 THEGQ9P2T0 379 aa28.91■■■□□ 2.22
PMS1-214ENST00000446877 PLA2G6O60733 806 aa28.9■■■□□ 2.22
PMS1-214ENST00000446877 SMPD1P17405 629 aa28.9■■■□□ 2.22
PMS1-214ENST00000446877 CCL23P55773 120 aa28.9■■■□□ 2.22
PMS1-214ENST00000446877 RCSD1Q6JBY9 416 aa28.9■■■□□ 2.22
PMS1-214ENST00000446877 OTOP2Q7RTS6 562 aa28.9■■■□□ 2.22
PMS1-214ENST00000446877 SEC62Q99442 399 aaKnown RBP28.9■■■□□ 2.22
PMS1-214ENST00000446877 ERC2O15083 957 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 CCDC85BQ15834 202 aaPredicted RBP28.89■■■□□ 2.22
PMS1-214ENST00000446877 KCTD1Q719H9 257 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 EEPD1Q7L9B9 569 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 RPUSD2Q8IZ73 545 aaKnown RBP28.89■■■□□ 2.22
PMS1-214ENST00000446877 TRPV6Q9H1D0 765 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 NKX2-4Q9H2Z4 354 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 Q9Y3F1 56 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 CHD9Q3L8U1 2897 aa28.89■■■□□ 2.22
PMS1-214ENST00000446877 TSPY2A6NKD2 308 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 SNAP25P60880 206 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 ASB2Q96Q27 587 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 FSD1Q9BTV5 496 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 NOC4LQ9BVI4 516 aaKnown RBP28.88■■■□□ 2.21
PMS1-214ENST00000446877 PDGFCQ9NRA1 345 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 CYP39A1Q9NYL5 469 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 PRR12Q9ULL5 1215 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 MUC3AQ02505 3323 aa28.88■■■□□ 2.21
PMS1-214ENST00000446877 MRPS5P82675 430 aaKnown RBP28.87■■■□□ 2.21
PMS1-214ENST00000446877 ADGRE1Q14246 886 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 NSMFQ6X4W1 530 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 FBXO16Q8IX29 292 aaPredicted RBP28.87■■■□□ 2.21
PMS1-214ENST00000446877 IL27Q8NEV9 243 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 VTA1Q9NP79 307 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 CCPG1Q9ULG6 757 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 SLC4A7Q9Y6M7 1214 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 GRIN2DO15399 1336 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 UMODL1Q5DID0 1318 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 TTC41PQ6P2S7 1318 aa28.87■■■□□ 2.21
PMS1-214ENST00000446877 B4GALT4O60513 344 aa28.86■■■□□ 2.21
PMS1-214ENST00000446877 MUM1L1Q5H9M0 696 aa28.86■■■□□ 2.21
PMS1-214ENST00000446877 TAPT1Q6NXT6 567 aa28.86■■■□□ 2.21
PMS1-214ENST00000446877 KIAA1211Q6ZU35 1233 aa28.86■■■□□ 2.21
PMS1-214ENST00000446877 DDX49Q9Y6V7 483 aaKnown RBP28.86■■■□□ 2.21
PMS1-214ENST00000446877 MYH4Q9Y623 1939 aa28.85■■■□□ 2.21
PMS1-214ENST00000446877 PSMC6P62333 389 aa28.85■■■□□ 2.21
PMS1-214ENST00000446877 ZMYM1Q5SVZ6 1142 aa28.85■■■□□ 2.21
PMS1-214ENST00000446877 TSPYL2Q9H2G4 693 aaPredicted RBP28.85■■■□□ 2.21
PMS1-214ENST00000446877 MTMR7Q9Y216 660 aa28.85■■■□□ 2.21
PMS1-214ENST00000446877 YBX2Q9Y2T7 364 aaKnown RBP28.85■■■□□ 2.21
PMS1-214ENST00000446877 PTGS1P23219 599 aa28.84■■■□□ 2.21
PMS1-214ENST00000446877 ADD3Q9UEY8 706 aaKnown RBP28.84■■■□□ 2.21
PMS1-214ENST00000446877 MCM3APO60318 1980 aa28.84■■■□□ 2.21
PMS1-214ENST00000446877 ZBBXA8MT70 800 aa28.83■■■□□ 2.21
PMS1-214ENST00000446877 CCDC96Q2M329 555 aa28.83■■■□□ 2.21
PMS1-214ENST00000446877 WNT8AQ9H1J5 351 aa28.83■■■□□ 2.21
PMS1-214ENST00000446877 RANBP6O60518 1105 aaKnown RBP28.82■■■□□ 2.2
PMS1-214ENST00000446877 NMT2O60551 498 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 ICAM1P05362 532 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 SUPT20HL2P0C7V6 817 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 CTDSPL2Q05D32 466 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 PPP2R2DQ66LE6 453 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 ADAMTS19Q8TE59 1207 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 ALDH8A1Q9H2A2 487 aaPredicted RBP28.82■■■□□ 2.2
PMS1-214ENST00000446877 IL17RBQ9NRM6 502 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 POLR3EQ9NVU0 708 aa28.82■■■□□ 2.2
PMS1-214ENST00000446877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.82■■■□□ 2.2
PMS1-214ENST00000446877 RABGGTBP53611 331 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 DUSP28Q4G0W2 176 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 TMEM63BQ5T3F8 832 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 PI4K2BQ8TCG2 481 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 DCAF4Q8WV16 495 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 PCDHA11Q9Y5I1 949 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 MYO9BQ13459 2157 aa28.81■■■□□ 2.2
PMS1-214ENST00000446877 COL9A1P20849 921 aa28.8■■■□□ 2.2
PMS1-214ENST00000446877 BAATQ14032 418 aaPredicted RBP28.8■■■□□ 2.2
PMS1-214ENST00000446877 MORC4Q8TE76 937 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms