RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LONP2Q86WA8 852 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ANKRD27Q96NW4 1050 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 MOV10L1Q9BXT6 1211 aaKnown RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 FOXP1Q9H334 677 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 TRAPPC11Q7Z392 1133 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 SDCCAG8Q86SQ7 713 aaPredicted RBP8.62□□□□□ -1.03
SMG1-202ENST00000446231 KIF2BQ8N4N8 673 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 MYL10Q9BUA6 226 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 ABHD10Q9NUJ1 306 aa8.62□□□□□ -1.03
SMG1-202ENST00000446231 PSMD14O00487 310 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 SERPINB6P35237 376 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 PSMD7P51665 324 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TTLL7Q6ZT98 887 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 C3orf20Q8ND61 904 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 B4GALNT2Q8NHY0 566 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TMEM60Q9H2L4 133 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 GPAA1O43292 621 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 CYB5D1Q6P9G0 228 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 PPP1R21Q6ZMI0 780 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 APPBP2Q92624 585 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 METTL22Q9BUU2 404 aaPredicted RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 PAIP2BQ9ULR5 123 aaKnown RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 L1RE1Q9UN81 338 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TRPC3Q13507 836 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 MMGT1Q8N4V1 131 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 FANCBQ8NB91 859 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 SEC16BQ96JE7 1060 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 A0A1B0GTH6 734 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 ZBTB17Q13105 803 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 NME8Q8N427 588 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 RGL1Q9NZL6 768 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TSPY2A6NKD2 308 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 MB21D1Q8N884 522 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 PI4K2BQ8TCG2 481 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 DNAJC9Q8WXX5 260 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 DDX20Q9UHI6 824 aaKnown RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 CDHR2Q9BYE9 1310 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TMEM154Q6P9G4 183 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TBC1D7Q9P0N9 293 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 DAAM1Q9Y4D1 1078 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 A2MP01023 1474 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 PASKQ96RG2 1323 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 ESYT3A0FGR9 886 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 NCK2O43639 380 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 MAP7D1Q3KQU3 841 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 RUNDC3BQ96NL0 473 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 AZI2Q9H6S1 392 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 NLRC4Q9NPP4 1024 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 FTCDO95954 541 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 MMEP08473 750 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 GCKRQ14397 625 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 MORC4Q8TE76 937 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 RIN2Q8WYP3 895 aaPredicted RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 MAGEF1Q9HAY2 307 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 PPP2R5BQ15173 497 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 KDRP35968 1356 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 SPATA4Q8NEY3 305 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 PIP4K2CQ8TBX8 421 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 TRMT112Q9UI30 125 aaKnown RBP8.61□□□□□ -1.03
SMG1-202ENST00000446231 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
SMG1-202ENST00000446231 ANO9A1A5B4 782 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 GRID2IPA4D2P6 1211 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 BTBD18B2RXH4 712 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 LGSNQ5TDP6 509 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 LMNB1P20700 586 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 EYA2O00167 538 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 GJC1P36383 396 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
SMG1-202ENST00000446231 XPO6Q96QU8 1125 aaKnown RBP8.6□□□□□ -1.03
SMG1-202ENST00000446231 PDP2Q9P2J9 529 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 CALUO43852 315 aaPredicted RBP8.6□□□□□ -1.03
SMG1-202ENST00000446231 TSGA10IPQ3SY00 556 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 NFRKBQ6P4R8 1299 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 ZNF449Q6P9G9 518 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 ANKRD35Q8N283 1001 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 HERC4Q5GLZ8 1057 aaPredicted RBP8.6□□□□□ -1.03
SMG1-202ENST00000446231 THAP9Q9H5L6 903 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 KIAA0586Q9BVV6 1533 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 FAM13AO94988 1023 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 MBD4O95243 580 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 C10orf76Q5T2E6 689 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 KSR1Q8IVT5 923 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 THOC2Q8NI27 1593 aaKnown RBP8.6□□□□□ -1.03
SMG1-202ENST00000446231 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 MAGEB6P1A0A0J9YX57 407 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 LZTS2Q9BRK4 669 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 TRAF3IP3Q9Y228 551 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 TOPBP1Q92547 1522 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 TNIP1Q15025 636 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 TEKT4Q8WW24 435 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 AATFQ9NY61 560 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMG1-202ENST00000446231 NEK9Q8TD19 979 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 TSNARE1Q96NA8 513 aa8.6□□□□□ -1.03
SMG1-202ENST00000446231 EYA1Q99502 592 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms