RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 NAPAP54920 295 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 TRIM29Q14134 588 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 KIF22Q14807 665 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 NOM1Q5C9Z4 860 aaKnown RBP15.18■□□□□ 0.02
TIMP1-204ENST00000445623 POTEEQ6S8J3 1075 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 TRERF1Q96PN7 1200 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 MAF1Q9H063 256 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 GLT8D2Q9H1C3 349 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 ACAD9Q9H845 621 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 RNF146Q9NTX7 359 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 BARHL2Q9NY43 387 aa15.18■□□□□ 0.02
TIMP1-204ENST00000445623 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
TIMP1-204ENST00000445623 RBBP6Q7Z6E9 1792 aaKnown RBP15.18■□□□□ 0.02
TIMP1-204ENST00000445623 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
TIMP1-204ENST00000445623 ERCC3P19447 782 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 GJB2P29033 226 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 SP3Q02447 781 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 PKN1Q16512 942 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 Q3C1V9 767 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 TEX2Q8IWB9 1127 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 GPKOWQ92917 476 aaPredicted RBP eCLIP15.17■□□□□ 0.02
TIMP1-204ENST00000445623 COA7Q96BR5 231 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
TIMP1-204ENST00000445623 GPR25O00155 361 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 STXBP3O00186 592 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 PEX10O60683 326 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
TIMP1-204ENST00000445623 FCGRTP55899 365 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 ARHGEF6Q15052 776 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 CUL5Q93034 780 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 RIPK3Q9Y572 518 aa15.16■□□□□ 0.02
TIMP1-204ENST00000445623 MGAMO43451 1857 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 ESYT2A0FGR8 921 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 STRNO43815 780 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 FKTNO75072 461 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 PDCP20941 246 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 CALML3P27482 149 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 GNA11P29992 359 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 LACTBP83111 547 aaPredicted RBP15.15■□□□□ 0.02
TIMP1-204ENST00000445623 KCTD2Q14681 263 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.15■□□□□ 0.02
TIMP1-204ENST00000445623 PLEKHH3Q7Z736 793 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 ERO1AQ96HE7 468 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 MMP19Q99542 508 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 PORCNQ9H237 461 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 EFCC1Q9HA90 598 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 MAP3K20Q9NYL2 800 aaKnown RBP15.15■□□□□ 0.02
TIMP1-204ENST00000445623 VPS54Q9P1Q0 977 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 PFASO15067 1338 aa15.15■□□□□ 0.02
TIMP1-204ENST00000445623 SMCHD1A6NHR9 2005 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
TIMP1-204ENST00000445623 FCER1AP12319 257 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 ADCY7P51828 1080 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
TIMP1-204ENST00000445623 NLRP5P59047 1200 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 ABRAQ8N0Z2 381 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 ANKRD35Q8N283 1001 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 RGS22Q8NE09 1264 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 PSTPIP2Q9H939 334 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
TIMP1-204ENST00000445623 SMCO2A6NFE2 343 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
TIMP1-204ENST00000445623 CFBP00751 764 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 PDIA4P13667 645 aaKnown RBP15.13■□□□□ 0.01
TIMP1-204ENST00000445623 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
TIMP1-204ENST00000445623 SAFBQ15424 915 aaKnown RBP eCLIP15.13■□□□□ 0.01
TIMP1-204ENST00000445623 NSMFQ6X4W1 530 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 RNF207Q6ZRF8 634 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 SOCS4Q8WXH5 440 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 CLEC4DQ8WXI8 215 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 AIFM3Q96NN9 605 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 ZMYND12Q9H0C1 365 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 RIC8AQ9NPQ8 531 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 SLC5A4Q9NY91 659 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 ZNF236Q9UL36 1845 aa15.13■□□□□ 0.01
TIMP1-204ENST00000445623 SLC15A5A6NIM6 579 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 H3BQV1 296 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 NFIBO00712 420 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 DTNBO60941 627 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 GNRH1P01148 92 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 HOXD10P28358 340 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 PSMC4P43686 418 aa15.12■□□□□ 0.01
TIMP1-204ENST00000445623 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms