RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SETXQ7Z333 2677 aaKnown RBP17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 CEP250Q9BV73 2442 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 ZEB2O60315 1214 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 VAMP4O75379 141 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 PTGS1P23219 599 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 TIMM10P62072 90 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 TNFAIP2Q03169 654 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 SPICE1Q8N0Z3 855 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 ATG2AQ2TAZ0 1938 aa17.45■□□□□ 0.38
SYNCRIP-203ENST00000444272 PITPNM1O00562 1244 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 CIAO1O76071 339 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 RALBP1Q15311 655 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 CTC1Q2NKJ3 1217 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 ARMCX2Q7L311 632 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 ZNF467Q7Z7K2 595 aaPredicted RBP17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 LRP2BPQ9P2M1 347 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 MYO7AQ13402 2215 aa17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 FASNP49327 2511 aaKnown RBP17.44■□□□□ 0.38
SYNCRIP-203ENST00000444272 FAM208BQ5VWN6 2430 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 DNAJC25-GNG10A0A024R161 153 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 LOC730098B7Z3J9 87 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 NCK2O43639 380 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 COPB2P35606 906 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 PPP4CP60510 307 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 NAA16Q6N069 864 aaPredicted RBP17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 SPATA5Q8NB90 893 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 KATNBL1Q9H079 304 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 ADAMTS5Q9UNA0 930 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 GNEQ9Y223 722 aaKnown RBP17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 ASPMQ8IZT6 3477 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 SPTBN2O15020 2390 aa17.43■□□□□ 0.38
SYNCRIP-203ENST00000444272 DYNC1LI2O43237 492 aaPredicted RBP17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 TBX10O75333 385 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 SHMT1P34896 483 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 GPM6BQ13491 265 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 TMEM105Q8N8V8 129 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 XAGE2Q96GT9 111 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 RIPOR3Q96MK2 946 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 EHD4Q9H223 541 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 DLL3Q9NYJ7 618 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 CD207Q9UJ71 328 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
SYNCRIP-203ENST00000444272 H3BNC9 293 aa17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 HOXB3P14651 431 aaPredicted RBP17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 CBX2Q14781 532 aaPredicted RBP17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 CCDC144CPQ8IYA2 1237 aa17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 MAGEB6Q8N7X4 407 aa17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 FGD4Q96M96 766 aa17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
SYNCRIP-203ENST00000444272 TRIP12Q14669 1992 aaPredicted RBP17.4■□□□□ 0.38
SYNCRIP-203ENST00000444272 NLRC5Q86WI3 1866 aa17.4■□□□□ 0.38
SYNCRIP-203ENST00000444272 VWA5AO00534 786 aa17.4■□□□□ 0.38
SYNCRIP-203ENST00000444272 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
SYNCRIP-203ENST00000444272 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
SYNCRIP-203ENST00000444272 FAM47CQ5HY64 1035 aa17.4■□□□□ 0.38
SYNCRIP-203ENST00000444272 HYAL1Q12794 435 aa17.39■□□□□ 0.37
SYNCRIP-203ENST00000444272 BFSP2Q13515 415 aa17.39■□□□□ 0.37
SYNCRIP-203ENST00000444272 REPS2Q8NFH8 660 aa17.39■□□□□ 0.37
SYNCRIP-203ENST00000444272 INSL6Q9Y581 213 aa17.39■□□□□ 0.37
SYNCRIP-203ENST00000444272 WDR46O15213 610 aaKnown RBP17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 TCTN1Q2MV58 587 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 CNKSR3Q6P9H4 555 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 KCNG4Q8TDN1 519 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 PPP1R13LQ8WUF5 828 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 SAMD11Q96NU1 681 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 RIPK3Q9Y572 518 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
SYNCRIP-203ENST00000444272 LINC01565O15544 149 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 SMPD1P17405 629 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 GTF2F1P35269 517 aaKnown RBP eCLIP17.37■□□□□ 0.371e-7■■■■■ 43.2
SYNCRIP-203ENST00000444272 MCAMP43121 646 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 SLC4A3P48751 1232 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 GPNMBQ14956 572 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 IGFLR1Q9H665 355 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 VCPKMTQ9H867 229 aa17.37■□□□□ 0.37
SYNCRIP-203ENST00000444272 RBAK-RBAKDNI3L0D1 243 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 ICAM3P32942 547 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 USP5P45974 858 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 PTPN21Q16825 1174 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 CLEC10AQ8IUN9 316 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 RPGRIP1Q96KN7 1286 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 PPP1R9AQ9ULJ8 1098 aa17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
SYNCRIP-203ENST00000444272 ABHD14A-ACY1A0A1B0GW23 586 aa17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 EXOSC9Q06265 439 aaKnown RBP17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 TMEM63BQ5T3F8 832 aa17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 ANKRD35Q8N283 1001 aa17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 CHAMP1Q96JM3 812 aa17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 TEX13BQ9BXU2 312 aa17.35■□□□□ 0.37
SYNCRIP-203ENST00000444272 USP44Q9H0E7 712 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms