RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 CCDC178Q5BJE1 867 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 SH3RF1Q7Z6J0 888 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 CCDC144CPQ8IYA2 1237 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 TRIM43Q96BQ3 446 aaPredicted RBP16.43■□□□□ 0.22
TREX1-202ENST00000444177 TTC14Q96N46 770 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 PRDM5Q9NQX1 630 aaPredicted RBP16.43■□□□□ 0.22
TREX1-202ENST00000444177 TNKSO95271 1327 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 SYNRGQ9UMZ2 1314 aa16.43■□□□□ 0.22
TREX1-202ENST00000444177 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 PDHBP11177 359 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 SLC16A2P36021 539 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 TRDNQ13061 729 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 CCSAPQ6IQ19 270 aaPredicted RBP16.42■□□□□ 0.22
TREX1-202ENST00000444177 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 ZSCAN10Q96SZ4 725 aaPredicted RBP16.42■□□□□ 0.22
TREX1-202ENST00000444177 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 KAT14Q9H8E8 782 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 GPCPD1Q9NPB8 672 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 PDLIM7Q9NR12 457 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 ZSWIM5Q9P217 1185 aa16.42■□□□□ 0.22
TREX1-202ENST00000444177 RBM8AQ9Y5S9 174 aaKnown RBP16.42■□□□□ 0.22
TREX1-202ENST00000444177 MYADML2A6NDP7 307 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 MOXD2PA6NHM9 499 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 ASB14A6NK59 587 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 ADCY6O43306 1168 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 ICAM1P05362 532 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 IRX5P78411 483 aaPredicted RBP16.41■□□□□ 0.22
TREX1-202ENST00000444177 DGKHQ86XP1 1220 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 BADQ92934 168 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 RANBP17Q9H2T7 1088 aaKnown RBP16.41■□□□□ 0.22
TREX1-202ENST00000444177 CCPG1Q9ULG6 757 aa16.41■□□□□ 0.22
TREX1-202ENST00000444177 MCM3APO60318 1980 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 CST5P28325 142 aaPredicted RBP16.4■□□□□ 0.22
TREX1-202ENST00000444177 GJA9P57773 515 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 SYDE2Q5VT97 1194 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
TREX1-202ENST00000444177 DEFB123Q8N688 67 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
TREX1-202ENST00000444177 PNMA1Q8ND90 353 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
TREX1-202ENST00000444177 SPC25Q9HBM1 224 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 ANO2Q9NQ90 1003 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 STARD7Q9NQZ5 370 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 CYP39A1Q9NYL5 469 aa16.4■□□□□ 0.22
TREX1-202ENST00000444177 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
TREX1-202ENST00000444177 CLTBP09497 229 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
TREX1-202ENST00000444177 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 SHHQ15465 462 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 GNASQ5JWF2 1037 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
TREX1-202ENST00000444177 CASC1Q6TDU7 716 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 NSMFQ6X4W1 530 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 Q7L0L9 218 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 CYB5R4Q7L1T6 521 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
TREX1-202ENST00000444177 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 TOX2Q96NM4 488 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
TREX1-202ENST00000444177 TAF6LQ9Y6J9 622 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 ASTN1O14525 1302 aa16.39■□□□□ 0.21
TREX1-202ENST00000444177 E7EWF7 191 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 KIAA0355O15063 1070 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 CDC45O75419 566 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 ASGR1P07306 291 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 GOLGA8HP0CJ92 632 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 SNHG28P0DPA3 235 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 ITGB8P26012 769 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 TNFAIP2Q03169 654 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 ANKRD33Q7Z3H0 272 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 GLT1D1Q96MS3 346 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
TREX1-202ENST00000444177 TMEM39AQ9NV64 488 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
TREX1-202ENST00000444177 ELP1O95163 1332 aa16.38■□□□□ 0.21
TREX1-202ENST00000444177 LAMA2P24043 3122 aaKnown RBP16.38■□□□□ 0.21
TREX1-202ENST00000444177 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
TREX1-202ENST00000444177 ERICH2A1L162 156 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 DCDC2CA8MYV0 355 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 CTAGE5O15320 804 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 NKX3-2P78367 333 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 FAAP100Q0VG06 881 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 BAATQ14032 418 aaPredicted RBP16.37■□□□□ 0.21
TREX1-202ENST00000444177 C9orf50Q5SZB4 431 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
TREX1-202ENST00000444177 STOX1Q6ZVD7 989 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
TREX1-202ENST00000444177 ANKS1AQ92625 1134 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 VTI1AQ96AJ9 217 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 MTMR10Q9NXD2 777 aa16.37■□□□□ 0.21
TREX1-202ENST00000444177 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
TREX1-202ENST00000444177 NFIBO00712 420 aa16.36■□□□□ 0.21
TREX1-202ENST00000444177 IFIT3O14879 490 aaKnown RBP16.36■□□□□ 0.21
TREX1-202ENST00000444177 RAG1P15918 1043 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms