RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, human

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG11-210	ENST00000442419	ZNF274	Q96GC6	653 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	INTS4	Q96HW7	963 aa	Known RBP	13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	PBX4	Q9BYU1	374 aa		13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	SPATC1L	Q9H0A9	340 aa		13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	MROH8	Q9H579	483 aa		13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	HOXC10	Q9NYD6	342 aa		13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	TPCN1	Q9ULQ1	816 aa		13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	XIRP2	A4UGR9	3374 aa		13.61	□□□□□ -0.23
SNHG11-210	ENST00000442419	PLIN4	Q96Q06	1357 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419		A0A1W2PQ45	241 aa	Predicted RBP	13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419		A0A1W2PQY0	241 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	SH2B2	O14492	632 aa	Predicted RBP	13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	ERCC3	P19447	782 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	NOV	P48745	357 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	FAAP100	Q0VG06	881 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	COG2	Q14746	738 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	RAB3GAP1	Q15042	981 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	SEC23A	Q15436	765 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	MB21D1	Q8N884	522 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	SLC44A5	Q8NCS7	719 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	ACER1	Q8TDN7	264 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	DYNLL2	Q96FJ2	89 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	MAML3	Q96JK9	1138 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	TCEANC2	Q96MN5	208 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	3e-6	■■■■□ 25.7
SNHG11-210	ENST00000442419	PRDM12	Q9H4Q4	367 aa		13.6	□□□□□ -0.23
SNHG11-210	ENST00000442419	DCDC2C	A8MYV0	355 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	RANBP6	O60518	1105 aa	Known RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	TIMP1	P01033	207 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	RCAN1	P53805	252 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	PPIG	Q13427	754 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	7e-7	■■□□□ 12
SNHG11-210	ENST00000442419	ADGRE1	Q14246	886 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	SART3	Q15020	963 aa	Known RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	ME3	Q16798	604 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	ABCB5	Q2M3G0	1257 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	RRP12	Q5JTH9	1297 aa	Known RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	PRAMEF19	Q5SWL8	479 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	MFSD5	Q6N075	450 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	IQCA1	Q86XH1	822 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	NEDD1	Q8NHV4	660 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	BRF1	Q92994	677 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	CCDC17	Q96LX7	622 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	TSEN34	Q9BSV6	310 aa	Known RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	LY9	Q9HBG7	655 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	MKNK2	Q9HBH9	465 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	DAXX	Q9UER7	740 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	TBX21	Q9UL17	535 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	HCN4	Q9Y3Q4	1203 aa		13.59	□□□□□ -0.23
SNHG11-210	ENST00000442419	IFIT3	O14879	490 aa	Known RBP	13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	PFKFB2	O60825	505 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	PRDM1	O75626	825 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	SHMT1	P34896	483 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	RAB30	Q15771	203 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	CERKL	Q49MI3	558 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	CHST3	Q7LGC8	479 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	DGKH	Q86XP1	1220 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	CHMP4C	Q96CF2	233 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	LRRC2	Q9BYS8	371 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	CABP5	Q9NP86	173 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	TOMM22	Q9NS69	142 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	NID2	Q14112	1375 aa		13.58	□□□□□ -0.24
SNHG11-210	ENST00000442419	ERICH2	A1L162	156 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	MOXD2P	A6NHM9	499 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	TSPY2	A6NKD2	308 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	PGK1	P00558	417 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	PBX2	P40425	430 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	FGD1	P98174	961 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	TFAP4	Q01664	338 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	AAK1	Q2M2I8	961 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	TMEM67	Q5HYA8	995 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	TMEM240	Q5SV17	173 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	NUP133	Q8WUM0	1156 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	UBAC1	Q9BSL1	405 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	GPHN	Q9NQX3	736 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	STARD7	Q9NQZ5	370 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	MROH7	Q68CQ1	1323 aa		13.57	□□□□□ -0.24
SNHG11-210	ENST00000442419	CHD7	Q9P2D1	2997 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	IGKV6D-41	A0A0C4DH26	115 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	ADAMTS4	O75173	837 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	LARGE1	O95461	756 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	FCER1A	P12319	257 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	BMP1	P13497	986 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	AKR1A1	P14550	325 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	PDIA3	P30101	505 aa	Known RBP	13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	DDIT3	P35638	169 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	SLC4A3	P48751	1232 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	ACLY	P53396	1101 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	APOBR	Q0VD83	1088 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	ST3GAL1	Q11201	340 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	WTAP	Q15007	396 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	PPP4R3B	Q5MIZ7	849 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	RCSD1	Q6JBY9	416 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	C16orf59	Q7L2K0	433 aa		13.56	□□□□□ -0.24
SNHG11-210	ENST00000442419	STK11IP	Q8N1F8	1099 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms