RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 TIMP1P01033 207 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 ITGB8P26012 769 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 GUCY1A2P33402 732 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 SHMT1P34896 483 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 PTPN5P54829 565 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 ATP8B2P98198 1209 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 FAAP100Q0VG06 881 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 SEMA3FQ13275 785 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 KCTD2Q14681 263 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 ANKRD33Q7Z3H0 272 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 ARMC2Q8NEN0 867 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
HDAC9-215ENST00000441986 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 GAS2L1Q99501 681 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-215ENST00000441986 TINF2Q9BSI4 451 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
HDAC9-215ENST00000441986 SH2D4AQ9H788 454 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 GPSM3Q9Y4H4 160 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
HDAC9-215ENST00000441986 ATAD5Q96QE3 1844 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 MAGEB6P1A0A0J9YX57 407 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 A0A1W2PQ45 241 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-215ENST00000441986 A0A1W2PQY0 241 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 A0A1W2PRG0 241 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 PGK1P00558 417 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 AKR1A1P14550 325 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 EPHB4P54760 987 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 MRPS5P82675 430 aaKnown RBP7.44□□□□□ -1.22
HDAC9-215ENST00000441986 TTF1Q15361 905 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-215ENST00000441986 AKNAD1Q5T1N1 836 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 MFSD5Q6N075 450 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 CCDC129Q6ZRS4 1044 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 TMEM179Q6ZVK1 233 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 SSH3Q8TE77 659 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 PPM1EQ8WY54 764 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 FRAT1Q92837 279 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-215ENST00000441986 VTI1AQ96AJ9 217 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 ASB2Q96Q27 587 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 UCN2Q96RP3 112 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 MMP19Q99542 508 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 CRNKL1Q9BZJ0 848 aaKnown RBP7.44□□□□□ -1.22
HDAC9-215ENST00000441986 PPP1R12CQ9BZL4 782 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 STARD7Q9NQZ5 370 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 MCM9Q9NXL9 1143 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 SWAP70Q9UH65 585 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 FAM184BQ9ULE4 1060 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 CNPY2Q9Y2B0 182 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 NOP58Q9Y2X3 529 aaKnown RBP7.44□□□□□ -1.22
HDAC9-215ENST00000441986 TMX2Q9Y320 296 aa7.44□□□□□ -1.22
HDAC9-215ENST00000441986 WDR46O15213 610 aaKnown RBP7.43□□□□□ -1.22
HDAC9-215ENST00000441986 BCAR3O75815 825 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 PDIA4P13667 645 aaKnown RBP7.43□□□□□ -1.22
HDAC9-215ENST00000441986 TRIM27P14373 513 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 COPB2P35606 906 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 STAT3P40763 770 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 ACLYP53396 1101 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 GABPAQ06546 454 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 TMEM132BQ14DG7 1078 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 ZNF792Q3KQV3 632 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 SLC9C2Q5TAH2 1124 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 RIOX2Q8IUF8 465 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 TMEM199Q8N511 208 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
HDAC9-215ENST00000441986 ZNF516Q92618 1163 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 EAF2Q96CJ1 260 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-215ENST00000441986 CCDC17Q96LX7 622 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 GLT1D1Q96MS3 346 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 RIOK1Q9BRS2 568 aaKnown RBP7.43□□□□□ -1.22
HDAC9-215ENST00000441986 SLC6A16Q9GZN6 736 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 SPC25Q9HBM1 224 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 DBNLQ9UJU6 430 aaKnown RBP7.43□□□□□ -1.22
HDAC9-215ENST00000441986 ADAMTS5Q9UNA0 930 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 ELP1O95163 1332 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 MROH7Q68CQ1 1323 aa7.43□□□□□ -1.22
HDAC9-215ENST00000441986 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-215ENST00000441986 PGK2P07205 417 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 ZNF865P0CJ78 1059 aaPredicted RBP7.42□□□□□ -1.22
HDAC9-215ENST00000441986 PPIGQ13427 754 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC9-215ENST00000441986 KCNA10Q16322 511 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 SIAH1Q8IUQ4 282 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 AMOTL1Q8IY63 956 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 SPICE1Q8N0Z3 855 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 USP38Q8NB14 1042 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 PCSK9Q8NBP7 692 aaKnown RBP7.42□□□□□ -1.22
HDAC9-215ENST00000441986 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC9-215ENST00000441986 ANTXR1Q9H6X2 564 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 VCPKMTQ9H867 229 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 KANSL2Q9H9L4 492 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 THEGQ9P2T0 379 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 MSRAQ9UJ68 235 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 XIRP2A4UGR9 3374 aa7.42□□□□□ -1.22
HDAC9-215ENST00000441986 CHD9Q3L8U1 2897 aa7.41□□□□□ -1.22
HDAC9-215ENST00000441986 VWA5AO00534 786 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms