RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 UBA7P41226 1012 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 KLRC3Q07444 240 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 NCAPHQ15003 741 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 IL17AQ16552 155 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 SPC24Q8NBT2 197 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 AMNQ9BXJ7 453 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 GTPBP4Q9BZE4 634 aaKnown RBP14.9□□□□□ -0.02
CPSF4-206ENST00000441580 TMEM60Q9H2L4 133 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 MYOZ2Q9NPC6 264 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
CPSF4-206ENST00000441580 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
CPSF4-206ENST00000441580 SYNRGQ9UMZ2 1314 aa14.9□□□□□ -0.02
CPSF4-206ENST00000441580 RAD21O60216 631 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 SLC16A2P36021 539 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 GSDMDP57764 484 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 IKQ13123 557 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-206ENST00000441580 CALCRLQ16602 461 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 PPP4R3AQ6IN85 833 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.89□□□□□ -0.03
CPSF4-206ENST00000441580 PSTPIP2Q9H939 334 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 IMPACTQ9P2X3 320 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
CPSF4-206ENST00000441580 WNT10BO00744 389 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 SLC26A4O43511 780 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
CPSF4-206ENST00000441580 R3HDM1Q15032 1099 aaKnown RBP14.88□□□□□ -0.03
CPSF4-206ENST00000441580 SHROOM1Q2M3G4 852 aaPredicted RBP14.88□□□□□ -0.03
CPSF4-206ENST00000441580 RRAGBQ5VZM2 374 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 MOXD1Q6UVY6 613 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 ENOX1Q8TC92 643 aaKnown RBP14.88□□□□□ -0.03
CPSF4-206ENST00000441580 TMEM260Q9NX78 707 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 TMX2Q9Y320 296 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 PCDHA1Q9Y5I3 950 aa14.88□□□□□ -0.03
CPSF4-206ENST00000441580 PLA2G6O60733 806 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 ASNSP08243 561 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 SLURP2P0DP57 97 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 AFMP43652 599 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 STAT2P52630 851 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 MAP3K10Q02779 954 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 KARSQ15046 597 aaKnown RBP14.87□□□□□ -0.03
CPSF4-206ENST00000441580 CABP7Q86V35 215 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 FAM160B2Q86V87 743 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 FBXO11Q86XK2 927 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 CCDC150Q8NCX0 1101 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 DPF2Q92785 391 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 CCDC47Q96A33 483 aaKnown RBP14.87□□□□□ -0.03
CPSF4-206ENST00000441580 ANO3Q9BYT9 981 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 STK17AQ9UEE5 414 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 BCS1LQ9Y276 419 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 MYH7BA7E2Y1 1941 aa14.87□□□□□ -0.03
CPSF4-206ENST00000441580 RBBP6Q7Z6E9 1792 aaKnown RBP14.87□□□□□ -0.03
CPSF4-206ENST00000441580 DICER1Q9UPY3 1922 aaKnown RBP14.86□□□□□ -0.03
CPSF4-206ENST00000441580 TMEM232C9JQI7 657 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 FOSP01100 380 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-206ENST00000441580 BMP6P22004 513 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 PTGS1P23219 599 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 HOXA7P31268 230 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-206ENST00000441580 CAP2P40123 477 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 FANCCQ00597 558 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 RRP1BQ14684 758 aaKnown RBP14.86□□□□□ -0.03
CPSF4-206ENST00000441580 UBE2SQ16763 222 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 ISM2Q6H9L7 571 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 IGSF22Q8N9C0 903 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 HOOK2Q96ED9 719 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 CALML4Q96GE6 196 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 MTMR9Q96QG7 549 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 TMEM39BQ9GZU3 492 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 VCPKMTQ9H867 229 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 TTC12Q9H892 705 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-206ENST00000441580 PPP1R1BQ9UD71 204 aaPredicted RBP14.86□□□□□ -0.03
CPSF4-206ENST00000441580 KDM3AQ9Y4C1 1321 aa14.86□□□□□ -0.03
CPSF4-206ENST00000441580 NRDCO43847 1150 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 LMOD1P29536 600 aaPredicted RBP14.85□□□□□ -0.03
CPSF4-206ENST00000441580 PPP1R2P41236 205 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 KCNB1Q14721 858 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 CCDC186Q7Z3E2 898 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 KCNF1Q9H3M0 494 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 IFNKQ9P0W0 207 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 PGAP2Q9UHJ9 254 aa14.85□□□□□ -0.03
CPSF4-206ENST00000441580 DDX25Q9UHL0 483 aaKnown RBP14.85□□□□□ -0.03
CPSF4-206ENST00000441580 A0A1W2PRG0 241 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 FZD9O00144 591 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 SLC37A4O43826 429 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 TDP2O95551 362 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 SERPINC1P01008 464 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 RPN1P04843 607 aaKnown RBP14.84□□□□□ -0.03
CPSF4-206ENST00000441580 PLCG1P19174 1290 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 USP11P51784 963 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 JAG1P78504 1218 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 AMPD3Q01432 767 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 MICALL2Q8IY33 904 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 CHURC1Q8WUH1 139 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 CDK5RAP3Q96JB5 506 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 NUP88Q99567 741 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-206ENST00000441580 XPO4Q9C0E2 1151 aaKnown RBP14.84□□□□□ -0.03
CPSF4-206ENST00000441580 HSD3B7Q9H2F3 369 aa14.84□□□□□ -0.03
CPSF4-206ENST00000441580 EHMT1Q9H9B1 1298 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms