RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 RFX5P48382 616 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 RTN1Q16799 776 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 SNX12Q9UMY4 172 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 LEMD3Q9Y2U8 911 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 USO1O60763 962 aaKnown RBP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 RBM5P52756 815 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC9-214ENST00000441542 CCDC170Q8IYT3 715 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 MB21D1Q8N884 522 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 TRIML1Q8N9V2 468 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 XAGE2Q96GT9 111 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 SEC16BQ96JE7 1060 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 NRKQ7Z2Y5 1582 aa8.34□□□□□ -1.07
HDAC9-214ENST00000441542 GMNCA6NCL1 334 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 NKRFO15226 690 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 FAM107AO95990 144 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MMP1P03956 469 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 CTNNA1P35221 906 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 SLC4A8Q2Y0W8 1093 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ANKRD20A8PQ5CZ79 823 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 RILPL1Q5EBL4 403 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MEX3CQ5U5Q3 659 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 CAPRIN2Q6IMN6 1127 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 IFT20Q8IY31 132 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 CCDC63Q8NA47 563 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF483Q8TF39 744 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 HPS3Q969F9 1004 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ATP6V1G3Q96LB4 118 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 GOPCQ9HD26 462 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ROBO2Q9HCK4 1378 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 JCADQ9P266 1359 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 PP2D1A8MPX8 630 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 GCOM1H8Y6P7 765 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ANP32DO95626 131 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MYZAPP0CAP1 466 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MAGEA1P43355 309 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 SKOR1P84550 965 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 EHHADHQ08426 723 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 IFFO1Q0D2I5 559 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ALS2CLQ60I27 953 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 SAAL1Q96ER3 474 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 TANGO6Q9C0B7 1094 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 NLRC4Q9NPP4 1024 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 THRAP3Q9Y2W1 955 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 SRPRBQ9Y5M8 271 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 XRN1Q8IZH2 1706 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 UBAP1LF5GYI3 381 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 VIMP08670 466 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MAGOHP61326 146 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 IRX1P78414 480 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 KRT71Q3SY84 523 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 EMBQ6PCB8 327 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 KDM7AQ6ZMT4 941 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 ADAT2Q7Z6V5 191 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MGARPQ8TDB4 240 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 CASKIN2Q8WXE0 1202 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 MAGOHBQ96A72 148 aaKnown RBP8.33□□□□□ -1.08
HDAC9-214ENST00000441542 RPGRIP1Q96KN7 1286 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 AP1M1Q9BXS5 423 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 DPH5Q9H2P9 285 aa8.33□□□□□ -1.08
HDAC9-214ENST00000441542 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 A8MUI8 341 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF263O14978 683 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 ATP6V1G2O95670 118 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 FOXD4Q12950 439 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 PAK2Q13177 524 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 PTGDRQ13258 359 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 TCIRG1Q13488 830 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 RRAGAQ7L523 313 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 SPICE1Q8N0Z3 855 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 TBC1D22AQ8WUA7 517 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 ALS2CR12Q96Q35 445 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 A1CFQ9NQ94 594 aaKnown RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 FAM217BQ9NTX9 383 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 ZSWIM5Q9P217 1185 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 HYOU1Q9Y4L1 999 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 XDHP47989 1333 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 PDHA1P08559 390 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 GFPT1Q06210 699 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 SPAG1Q07617 926 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 WLSQ5T9L3 541 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 GKAP1Q5VSY0 366 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 CSGALNACT2Q8N6G5 542 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 HELBQ8NG08 1087 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 RAPGEF5Q92565 580 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 ELAC2Q9BQ52 826 aaKnown RBP8.32□□□□□ -1.08
HDAC9-214ENST00000441542 NUP58Q9BVL2 599 aa8.32□□□□□ -1.08
HDAC9-214ENST00000441542 NAPBQ9H115 298 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms