RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SUPT16HQ9Y5B9 1047 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 RIF1Q5UIP0 2472 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 ANKRD11Q6UB99 2663 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 MYO1BO43795 1136 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 ADCY3O60266 1144 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 DKK1O94907 266 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 FCGRTP55899 365 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 GNAI1P63096 354 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 CALD1Q05682 793 aaKnown RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 SF3B3Q15393 1217 aaKnown RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 DACT2Q5SW24 774 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 STRIP1Q5VSL9 837 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 FAM35AQ86V20 835 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 NLRP10Q86W26 655 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 ALDH16A1Q8IZ83 802 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 C8orf58Q8NAV2 365 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 TSEN2Q8NCE0 465 aaKnown RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 ZBED3Q96IU2 234 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 ASB2Q96Q27 587 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 THEGQ9P2T0 379 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 DMGDHQ9UI17 866 aaKnown RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 MAFBQ9Y5Q3 323 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-206ENST00000441089 CSADQ9Y600 493 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 REV3LO60673 3130 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 COL4A1P02462 1669 aa6.04□□□□□ -1.44
PTPN4-206ENST00000441089 ZNF804BA4D1E1 1349 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 XDHP47989 1333 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 ZFHX2Q9C0A1 2572 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 PAX4O43316 350 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 COBLO75128 1261 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 VAMP4O75379 141 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 BCAR3O75815 825 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 TAL1P17542 331 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 MRPS5P82675 430 aaKnown RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 SMAD3P84022 425 aaKnown RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 PRKCZQ05513 592 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 SNAPC2Q13487 334 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 DLGAP5Q15398 846 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 TAF7Q15545 349 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 DIS3LQ8TF46 1054 aaKnown RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 LRFN3Q9BTN0 628 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 C11orf49Q9H6J7 331 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 TSPYL4Q9UJ04 414 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 RBM19Q9Y4C8 960 aaKnown RBP6.03□□□□□ -1.44
PTPN4-206ENST00000441089 BRWD1Q9NSI6 2320 aa6.03□□□□□ -1.44
PTPN4-206ENST00000441089 ATRXP46100 2492 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 CHD7Q9P2D1 2997 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 TRIOO75962 3097 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 BTBD19C9JJ37 291 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 ELL2O00472 640 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 TGFB1P01137 390 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 CTGFP29279 349 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 MRE11P49959 708 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 RARSP54136 660 aaKnown RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 TNFAIP1Q13829 316 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 TMEM31Q5JXX7 168 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 NBPF12Q5TAG4 269 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 ZNF594Q96JF6 807 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 CALR3Q96L12 384 aaKnown RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 TTYH1Q9H313 450 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 BABAM1Q9NWV8 329 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 TFIP11Q9UBB9 837 aaKnown RBP6.02□□□□□ -1.45
PTPN4-206ENST00000441089 CPA4Q9UI42 421 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 CHMP3Q9Y3E7 222 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 C5orf42Q9H799 3197 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 CACNA1HO95180 2353 aa6.02□□□□□ -1.45
PTPN4-206ENST00000441089 PLIN1O60240 522 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 ATP2B4P23634 1241 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 RRP1P56182 461 aaKnown RBP6.01□□□□□ -1.45
PTPN4-206ENST00000441089 EIF4A1P60842 406 aaKnown RBP6.01□□□□□ -1.45
PTPN4-206ENST00000441089 VGLL4Q14135 290 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 TWISTNBQ3B726 338 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-206ENST00000441089 IGF2-ASQ6U949 168 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.01□□□□□ -1.45
PTPN4-206ENST00000441089 ERO1BQ86YB8 467 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 KIAA0825Q8IV33 1275 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 AGGF1Q8N302 714 aaeCLIP6.01□□□□□ -1.45
PTPN4-206ENST00000441089 DTWD1Q8N5C7 304 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 USP38Q8NB14 1042 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 SSH1Q8WYL5 1049 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 PPP1R12CQ9BZL4 782 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 TNNQ9UQP3 1299 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 CHD6Q8TD26 2715 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 AK9Q5TCS8 1911 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 FAM186AA6NE01 2351 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 XIRP2A4UGR9 3374 aa6.01□□□□□ -1.45
PTPN4-206ENST00000441089 USP34Q70CQ2 3546 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 ARAP2Q8WZ64 1704 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 KIAA1324LA8MWY0 1029 aaPredicted RBP6□□□□□ -1.45
PTPN4-206ENST00000441089 LGR5O75473 907 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 CT47B1P0C2W7 299 aaPredicted RBP6□□□□□ -1.45
PTPN4-206ENST00000441089 RASA1P20936 1047 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 TXKP42681 527 aa6□□□□□ -1.45
PTPN4-206ENST00000441089 FLT3LGP49771 235 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms