RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
PLOD3-205ENST00000440925 HEATR3Q7Z4Q2 680 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 TRIM22Q8IYM9 498 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
PLOD3-205ENST00000440925 PHF20Q9BVI0 1012 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 ARHGAP39Q9C0H5 1083 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 TSKSQ9UJT2 592 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 SMC3Q9UQE7 1217 aa17.18■□□□□ 0.34
PLOD3-205ENST00000440925 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
PLOD3-205ENST00000440925 PCNTO95613 3336 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 FOSBP53539 338 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
PLOD3-205ENST00000440925 GHRHRQ02643 423 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
PLOD3-205ENST00000440925 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 GTF3C2Q8WUA4 911 aaPredicted RBP17.17■□□□□ 0.34
PLOD3-205ENST00000440925 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
PLOD3-205ENST00000440925 SMCO2A6NFE2 343 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 GPR25O00155 361 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 GUCY1B3Q02153 619 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 PKP1Q13835 747 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 BECN1Q14457 450 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 EARS2Q5JPH6 523 aaKnown RBP17.16■□□□□ 0.34
PLOD3-205ENST00000440925 KRT40Q6A162 431 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 USP17L6PQ6QN14 398 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 RGS22Q8NE09 1264 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 SHCBP1Q8NEM2 672 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 RNF146Q9NTX7 359 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
PLOD3-205ENST00000440925 GJD2Q9UKL4 321 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 ABCB11O95342 1321 aa17.16■□□□□ 0.34
PLOD3-205ENST00000440925 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
PLOD3-205ENST00000440925 SYT1P21579 422 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
PLOD3-205ENST00000440925 AKAP17AQ02040 695 aaKnown RBP17.15■□□□□ 0.34
PLOD3-205ENST00000440925 MAP2K1Q02750 393 aaPredicted RBP17.15■□□□□ 0.34
PLOD3-205ENST00000440925 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 NCAPG2Q86XI2 1143 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 USP6NLQ92738 828 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 TNFRSF25Q93038 417 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 FGD4Q96M96 766 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 RBM27Q9P2N5 1060 aaKnown RBP17.15■□□□□ 0.34
PLOD3-205ENST00000440925 MRPL11Q9Y3B7 192 aaKnown RBP17.15■□□□□ 0.34
PLOD3-205ENST00000440925 ASTN1O14525 1302 aa17.15■□□□□ 0.34
PLOD3-205ENST00000440925 ESYT2A0FGR8 921 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 COBLO75128 1261 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 SLC25A27O95847 323 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
PLOD3-205ENST00000440925 HSD17B4P51659 736 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
PLOD3-205ENST00000440925 UBE2SQ16763 222 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 LARP1BQ659C4 914 aaKnown RBP17.14■□□□□ 0.33
PLOD3-205ENST00000440925 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 TRIM47Q96LD4 638 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
PLOD3-205ENST00000440925 A1CFQ9NQ94 594 aaKnown RBP17.14■□□□□ 0.33
PLOD3-205ENST00000440925 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
PLOD3-205ENST00000440925 DNAJC25-GNG10A0A024R161 153 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 BTBD18B2RXH4 712 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 hCG_1984214I3L0E3 225 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 PTPREP23469 700 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 HOXA13P31271 388 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-205ENST00000440925 NAPAP54920 295 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-205ENST00000440925 CNTN2Q02246 1040 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 MORN1Q5T089 497 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 ZNF713Q8N859 430 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-205ENST00000440925 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-205ENST00000440925 TAAR1Q96RJ0 339 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 MROH8Q9H579 483 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 CYP39A1Q9NYL5 469 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 MTMR6Q9Y217 621 aa17.13■□□□□ 0.33
PLOD3-205ENST00000440925 CTDP1Q9Y5B0 961 aaPredicted RBP17.13■□□□□ 0.33
PLOD3-205ENST00000440925 DDX49Q9Y6V7 483 aaKnown RBP17.13■□□□□ 0.33
PLOD3-205ENST00000440925 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 SOWAHBA6NEL2 793 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 PIK3CDO00329 1044 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 IGHA2P01877 340 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 MMP1P03956 469 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 PGK2P07205 417 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 RPS6P62753 249 aaKnown RBP17.12■□□□□ 0.33
PLOD3-205ENST00000440925 SP3Q02447 781 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 NR5A1Q13285 461 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
PLOD3-205ENST00000440925 SLC30A10Q6XR72 485 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms