RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 GZF1Q9H116 711 aaPredicted RBP7.82□□□□□ -1.16
CHD6-204ENST00000440647 ACSS3Q9H6R3 686 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 CRIM1Q9NZV1 1036 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
CHD6-204ENST00000440647 ANKRD31Q8N7Z5 1873 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 COL11A2P13942 1736 aaPredicted RBP7.81□□□□□ -1.16
CHD6-204ENST00000440647 RAB6AP20340 208 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 LMNB1P20700 586 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 BMP6P22004 513 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 EIF4BP23588 611 aaKnown RBP7.81□□□□□ -1.16
CHD6-204ENST00000440647 ZNF252P-AS1Q0IIN9 211 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 DTX1Q86Y01 620 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 ZNF496Q96IT1 587 aaPredicted RBP7.81□□□□□ -1.16
CHD6-204ENST00000440647 FMNL2Q96PY5 1086 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 KRTAP4-12Q9BQ66 201 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 SEMA6CQ9H3T2 930 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 PRKAG2Q9UGJ0 569 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 NUDCQ9Y266 331 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 PCDHGC5Q9Y5F6 944 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 AK5Q9Y6K8 562 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 CARMIL3Q8ND23 1372 aa7.81□□□□□ -1.16
CHD6-204ENST00000440647 BTBD11A6QL63 1104 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 FBXO24O75426 580 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 F13BP05160 661 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 PRKAR2BP31323 418 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 PDE6BP35913 854 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 IL6STP40189 918 aaPredicted RBP7.8□□□□□ -1.16
CHD6-204ENST00000440647 ST5P78524 1137 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 ID3Q02535 119 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 FSTL1Q12841 308 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 MAP1SQ66K74 1059 aaPredicted RBP7.8□□□□□ -1.16
CHD6-204ENST00000440647 NPAS4Q8IUM7 802 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
CHD6-204ENST00000440647 ZNF622Q969S3 477 aaKnown RBP eCLIP7.8□□□□□ -1.161e-11■■■□□ 15.4
CHD6-204ENST00000440647 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 DUSP9Q99956 384 aaKnown RBP7.8□□□□□ -1.16
CHD6-204ENST00000440647 ATXN3LQ9H3M9 355 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 CBX8Q9HC52 389 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 CACNA2D2Q9NY47 1150 aa7.8□□□□□ -1.16
CHD6-204ENST00000440647 OAS3Q9Y6K5 1087 aaKnown RBP7.8□□□□□ -1.16
CHD6-204ENST00000440647 ARFGEF2Q9Y6D5 1785 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 PAGE1O75459 146 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
CHD6-204ENST00000440647 TAL1P17542 331 aaPredicted RBP7.79□□□□□ -1.16
CHD6-204ENST00000440647 EIF5P55010 431 aaKnown RBP7.79□□□□□ -1.16
CHD6-204ENST00000440647 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
CHD6-204ENST00000440647 TBC1D9BQ66K14 1250 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 ZAR1Q86SH2 424 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 CNBD1Q8NA66 436 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 SMC1BQ8NDV3 1235 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 IL17REQ8NFR9 667 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 TBC1D32Q96NH3 1257 aa7.79□□□□□ -1.16
CHD6-204ENST00000440647 DICER1Q9UPY3 1922 aaKnown RBP7.79□□□□□ -1.16
CHD6-204ENST00000440647 GLTPD2A6NH11 291 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 A1BGP04217 495 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 NEFMP07197 916 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 SPINK2P20155 84 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 ADMP35318 185 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 CPSF6Q16630 551 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHD6-204ENST00000440647 CCDC27Q2M243 656 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 PRR5LQ6MZQ0 368 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 SEZ6L2Q6UXD5 910 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 SHISA5Q8N114 240 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 GRIN3AQ8TCU5 1115 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 GPBAR1Q8TDU6 330 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 GATA6Q92908 595 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 BRIP1Q9BX63 1249 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 OSBPL1AQ9BXW6 950 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 DISC1Q9NRI5 854 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 RNF19AQ9NV58 838 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 CYP8B1Q9UNU6 501 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 ZNF652Q9Y2D9 606 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 CEMIPQ8WUJ3 1361 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 LAMB4A4D0S4 1761 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 FER1L6Q2WGJ9 1857 aa7.78□□□□□ -1.16
CHD6-204ENST00000440647 VEGFAP15692 232 aaPredicted RBP7.77□□□□□ -1.17
CHD6-204ENST00000440647 ERCC3P19447 782 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 LRRC14Q15048 493 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 ZC3H12AQ5D1E8 599 aaKnown RBP7.77□□□□□ -1.17
CHD6-204ENST00000440647 SV2BQ7L1I2 683 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 ZNF428Q96B54 188 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 PHACTR3Q96KR7 559 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 METTL22Q9BUU2 404 aaPredicted RBP7.77□□□□□ -1.17
CHD6-204ENST00000440647 PIDD1Q9HB75 910 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 TTF2Q9UNY4 1162 aaKnown RBP7.77□□□□□ -1.17
CHD6-204ENST00000440647 LEMD3Q9Y2U8 911 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 DAGLAQ9Y4D2 1042 aa7.77□□□□□ -1.17
CHD6-204ENST00000440647 DLG5Q8TDM6 1919 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 KCNQ3O43525 872 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 CAMTA2O94983 1202 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 CELA3AP09093 270 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 SNRPA1P09661 255 aaKnown RBP7.76□□□□□ -1.17
CHD6-204ENST00000440647 HTRA3P83110 453 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 SOGA3Q5TF21 947 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 SCARA3Q6AZY7 606 aa7.76□□□□□ -1.17
CHD6-204ENST00000440647 MCM10Q7L590 875 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms