RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
SHROOM1-204ENST00000440118 C6orf222P0C671 652 aaPredicted RBP23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 TRIM60Q495X7 471 aa23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 IFIT1BQ5T764 474 aaKnown RBP23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 ENAHQ8N8S7 591 aaPredicted RBP23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 GDF15Q99988 308 aa23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 ZSWIM5Q9P217 1185 aa23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 ADD3Q9UEY8 706 aaKnown RBP23.24■■□□□ 1.31
SHROOM1-204ENST00000440118 DUSP11O75319 330 aaKnown RBP23.23■■□□□ 1.31
SHROOM1-204ENST00000440118 SNHG28P0DPA3 235 aa23.23■■□□□ 1.31
SHROOM1-204ENST00000440118 RALYLQ86SE5 291 aaKnown RBP23.23■■□□□ 1.31
SHROOM1-204ENST00000440118 LTBP2Q14767 1821 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 A0A1W2PQ45 241 aaPredicted RBP23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 A0A1W2PQY0 241 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 SOWAHBA6NEL2 793 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 ADAMTS4O75173 837 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 PARP1P09874 1014 aaKnown RBP23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 BMP8BP34820 402 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 USH1GQ495M9 461 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 ASPRV1Q53RT3 343 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 MPHOSPH6Q99547 160 aaKnown RBP23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 PCDH10Q9P2E7 1040 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 WDR19Q8NEZ3 1342 aa23.22■■□□□ 1.31
SHROOM1-204ENST00000440118 ERICH2A1L162 156 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 NFIBO00712 420 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 CALML3P27482 149 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 BAATQ14032 418 aaPredicted RBP23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 RNF207Q6ZRF8 634 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 KIAA1211Q6ZU35 1233 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 EEPD1Q7L9B9 569 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 NUP133Q8WUM0 1156 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 TSEN34Q9BSV6 310 aaKnown RBP23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 UBA5Q9GZZ9 404 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 STARD7Q9NQZ5 370 aa23.21■■□□□ 1.31
SHROOM1-204ENST00000440118 MOXD2PA6NHM9 499 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 SGSM2O43147 1006 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 ACLYP53396 1101 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 TNFAIP2Q03169 654 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 PTH1RQ03431 593 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 FBXO16Q8IX29 292 aaPredicted RBP23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 PCSK9Q8NBP7 692 aaKnown RBP23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 ANKS1AQ92625 1134 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 VTI1AQ96AJ9 217 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 CPVLQ9H3G5 476 aa23.2■■□□□ 1.3
SHROOM1-204ENST00000440118 PQBP1O60828 265 aaKnown RBP23.19■■□□□ 1.3
SHROOM1-204ENST00000440118 SART3Q15020 963 aaKnown RBP23.19■■□□□ 1.3
SHROOM1-204ENST00000440118 SNX17Q15036 470 aa23.19■■□□□ 1.3
SHROOM1-204ENST00000440118 SLC30A10Q6XR72 485 aa23.19■■□□□ 1.3
SHROOM1-204ENST00000440118 TDHQ8IZJ6 230 aa23.19■■□□□ 1.3
SHROOM1-204ENST00000440118 GLT1D1Q96MS3 346 aa23.19■■□□□ 1.3
SHROOM1-204ENST00000440118 CYP21A2P08686 494 aa23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 KCNA10Q16322 511 aa23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 GNASQ5JWF2 1037 aa23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 PURBQ96QR8 312 aaKnown RBP23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 AP5M1Q9H0R1 490 aa23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 DDX49Q9Y6V7 483 aaKnown RBP23.18■■□□□ 1.3
SHROOM1-204ENST00000440118 ASTN1O14525 1302 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 MYADML2A6NDP7 307 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 IFIT3O14879 490 aaKnown RBP23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 ADCY6O43306 1168 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 ALDH5A1P51649 535 aaPredicted RBP23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 TLE2Q04725 743 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 C1orf53Q5VUE5 145 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 CYB5R4Q7L1T6 521 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 TLK2Q86UE8 772 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 NCOA7Q8NI08 942 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 KATNBL1Q9H079 304 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 VAT1LQ9HCJ6 419 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 VTA1Q9NP79 307 aa23.17■■□□□ 1.3
SHROOM1-204ENST00000440118 CST5P28325 142 aaPredicted RBP23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 GJA9P57773 515 aa23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 ADGRF4Q8IZF3 695 aa23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 KLHDC9Q8NEP7 349 aa23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 CLEC4DQ8WXI8 215 aa23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 UPF3AQ9H1J1 476 aaKnown RBP23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 PDLIM7Q9NR12 457 aa23.16■■□□□ 1.3
SHROOM1-204ENST00000440118 ABCB11O95342 1321 aa23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 B4DLN1 442 aa23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 CLTBP09497 229 aa23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 MRPL12P52815 198 aaKnown RBP23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 RPS6P62753 249 aaKnown RBP23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 PDE4DQ08499 809 aa23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 RBM8AQ9Y5S9 174 aaKnown RBP23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 SZT2Q5T011 3432 aa23.15■■□□□ 1.3
SHROOM1-204ENST00000440118 MROH7Q68CQ1 1323 aa23.14■■□□□ 1.3
SHROOM1-204ENST00000440118 LOC102724159A0A0B4J2E5 919 aa23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 DCDC2CA8MYV0 355 aa23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 E7EWF7 191 aa23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 ASGR1P07306 291 aa23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 BEX3Q00994 111 aa23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 WTAPQ15007 396 aa23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 PWP2Q15269 919 aaKnown RBP23.14■■□□□ 1.29
SHROOM1-204ENST00000440118 ZEB2O60315 1214 aa23.13■■□□□ 1.29
SHROOM1-204ENST00000440118 IRX5P78411 483 aaPredicted RBP23.13■■□□□ 1.29
SHROOM1-204ENST00000440118 SEC23AQ15436 765 aa23.13■■□□□ 1.29
SHROOM1-204ENST00000440118 FSCN1Q16658 493 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms