RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 MSNP26038 577 aaKnown RBP17.08■□□□□ 0.32
CPSF7-205ENST00000439958 TRAPPC10P48553 1259 aa17.08■□□□□ 0.32
CPSF7-205ENST00000439958 SMC2O95347 1197 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 GPR162Q16538 588 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 GALNT17Q6IS24 598 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 AMNQ9BXJ7 453 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 SSBP05455 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
CPSF7-205ENST00000439958 ZNF76P36508 570 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 MAPK8IP1Q9UQF2 711 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 SPDYE3A6NKU9 549 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
CPSF7-205ENST00000439958 CALCRLQ16602 461 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-205ENST00000439958 HPSEQ9Y251 543 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 ATRNL1Q5VV63 1379 aa17.07■□□□□ 0.32
CPSF7-205ENST00000439958 RPS12P25398 132 aaKnown RBP17.06■□□□□ 0.32
CPSF7-205ENST00000439958 SPP2Q13103 211 aa17.06■□□□□ 0.32
CPSF7-205ENST00000439958 TTLL12Q14166 644 aaPredicted RBP17.06■□□□□ 0.32
CPSF7-205ENST00000439958 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
CPSF7-205ENST00000439958 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
CPSF7-205ENST00000439958 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
CPSF7-205ENST00000439958 OR52Z1P0C646 297 aa17.06■□□□□ 0.32
CPSF7-205ENST00000439958 STX17P56962 302 aa17.06■□□□□ 0.32
CPSF7-205ENST00000439958 IL17AQ16552 155 aa17.06■□□□□ 0.32
CPSF7-205ENST00000439958 AP5Z1O43299 807 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 MTMR2Q13614 643 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 IQUBQ8NA54 791 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 PICK1Q9NRD5 415 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 FZD9O00144 591 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 UVSSAQ2YD98 709 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 MKL1Q969V6 931 aa17.05■□□□□ 0.32
CPSF7-205ENST00000439958 FLOT1O75955 427 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-205ENST00000439958 RBM43Q6ZSC3 357 aaKnown RBP17.04■□□□□ 0.32
CPSF7-205ENST00000439958 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
CPSF7-205ENST00000439958 SH2D4AQ9H788 454 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 TTC12Q9H892 705 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-205ENST00000439958 POTEMA6NI47 508 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 SLC37A4O43826 429 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 NOVP48745 357 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 TPM4P67936 248 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
CPSF7-205ENST00000439958 DDX25Q9UHL0 483 aaKnown RBP17.04■□□□□ 0.32
CPSF7-205ENST00000439958 CDK11BP21127 795 aaKnown RBP17.03■□□□□ 0.32
CPSF7-205ENST00000439958 NLRP12P59046 1061 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 PRR16Q569H4 304 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 VCPKMTQ9H867 229 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 PKD2L1Q9P0L9 805 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 C9orf131Q5VYM1 1079 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 TBC1D5Q92609 795 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 DPF2Q92785 391 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 RIC8AQ9NPQ8 531 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 GPRC5DQ9NZD1 345 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 ZHX2Q9Y6X8 837 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 ESPNB1AK53 854 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 TMEM266Q2M3C6 531 aa17.03■□□□□ 0.32
CPSF7-205ENST00000439958 ZNF579Q8NAF0 562 aaKnown RBP17.03■□□□□ 0.32
CPSF7-205ENST00000439958 TPD52L1Q16890 204 aaPredicted RBP17.02■□□□□ 0.32
CPSF7-205ENST00000439958 DAGLBQ8NCG7 672 aa17.02■□□□□ 0.32
CPSF7-205ENST00000439958 GMCL1P1Q8NEA9 526 aa17.02■□□□□ 0.32
CPSF7-205ENST00000439958 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.32
CPSF7-205ENST00000439958 GMCL1Q96IK5 515 aa17.02■□□□□ 0.32
CPSF7-205ENST00000439958 ALAS1P13196 640 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.31
CPSF7-205ENST00000439958 FKBP1CQ5VVH2 108 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 CABP7Q86V35 215 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 MTMR14Q8NCE2 650 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 PAGE5Q96GU1 130 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 TIGD1Q96MW7 591 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 PPP1R9BQ96SB3 815 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 ANO3Q9BYT9 981 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.31
CPSF7-205ENST00000439958 SERPINC1P01008 464 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 CCDC39Q9UFE4 941 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 MYH15Q9Y2K3 1946 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 MYH4Q9Y623 1939 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 M0R2N6 131 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 ACTN4O43707 911 aaKnown RBP17.01■□□□□ 0.31
CPSF7-205ENST00000439958 SLFN14P0C7P3 912 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 PLS1Q14651 629 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 MAN1B1Q9UKM7 699 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-205ENST00000439958 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.317e-7■□□□□ 11.1
CPSF7-205ENST00000439958 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 KANK3Q6NY19 840 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 SLC30A10Q6XR72 485 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 EEF2KMTQ96G04 330 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 CCPG1Q9ULG6 757 aa17.01■□□□□ 0.31
CPSF7-205ENST00000439958 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
CPSF7-205ENST00000439958 LONP1P36776 959 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms