RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ARRDC4Q8NCT1 418 aa28.02■■■□□ 2.08
CPNE1-217ENST00000439669 VAT1LQ9HCJ6 419 aa28.02■■■□□ 2.08
CPNE1-217ENST00000439669 PTPDC1A2A3K4 754 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 SOWAHBA6NEL2 793 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 H0YGN5 161 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 DNM1LO00429 736 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 PRC1O43663 620 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 BAATQ14032 418 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-217ENST00000439669 GJC2Q5T442 439 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-217ENST00000439669 CLEC4DQ8WXI8 215 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 NR2E3Q9Y5X4 410 aa28.01■■■□□ 2.07
CPNE1-217ENST00000439669 KLRF2D3W0D1 207 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 MCM5P33992 734 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 GRM4Q14833 912 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 CATIPQ7Z7H3 387 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 IGDCC4Q8TDY8 1250 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 XPNPEP3Q9NQH7 507 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 MAD2L2Q9UI95 211 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 MCM3APO60318 1980 aa28■■■□□ 2.07
CPNE1-217ENST00000439669 ASB14A6NK59 587 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 KBTBD13C9JR72 458 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 COL6A1P12109 1028 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 ACVR2BQ13705 512 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 QRICH1Q2TAL8 776 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 SLC30A10Q6XR72 485 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 LENG1Q96BZ8 264 aaPredicted RBP27.99■■■□□ 2.07
CPNE1-217ENST00000439669 ABHD16BQ9H3Z7 469 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 JMJD4Q9H9V9 463 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 FAM184BQ9ULE4 1060 aa27.99■■■□□ 2.07
CPNE1-217ENST00000439669 PALM3A6NDB9 673 aaPredicted RBP27.98■■■□□ 2.07
CPNE1-217ENST00000439669 RNF207Q6ZRF8 634 aa27.98■■■□□ 2.07
CPNE1-217ENST00000439669 PURBQ96QR8 312 aaKnown RBP27.98■■■□□ 2.07
CPNE1-217ENST00000439669 SENP6Q9GZR1 1112 aaPredicted RBP27.98■■■□□ 2.07
CPNE1-217ENST00000439669 LY9Q9HBG7 655 aa27.98■■■□□ 2.07
CPNE1-217ENST00000439669 GPHNQ9NQX3 736 aaPredicted RBP27.98■■■□□ 2.07
CPNE1-217ENST00000439669 ASTN1O14525 1302 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 ABCB11O95342 1321 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 CALML3P27482 149 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 NFXL1Q6ZNB6 911 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 FBXO11Q86XK2 927 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 C7orf61Q8IZ16 206 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 NUP133Q8WUM0 1156 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 TMEM87BQ96K49 555 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 MTA3Q9BTC8 594 aa27.97■■■□□ 2.07
CPNE1-217ENST00000439669 ADD3Q9UEY8 706 aaKnown RBP27.97■■■□□ 2.07
CPNE1-217ENST00000439669 PGK1P00558 417 aa27.96■■■□□ 2.07
CPNE1-217ENST00000439669 TROAPQ12815 778 aa27.96■■■□□ 2.07
CPNE1-217ENST00000439669 LRRC41Q15345 812 aa27.96■■■□□ 2.07
CPNE1-217ENST00000439669 ALPK3Q96L96 1907 aa27.96■■■□□ 2.07
CPNE1-217ENST00000439669 LCTP09848 1927 aa27.95■■■□□ 2.06
CPNE1-217ENST00000439669 SH2B2O14492 632 aaPredicted RBP27.95■■■□□ 2.06
CPNE1-217ENST00000439669 RPS6P62753 249 aaKnown RBP27.95■■■□□ 2.06
CPNE1-217ENST00000439669 COL9A3Q14050 684 aaPredicted RBP27.95■■■□□ 2.06
CPNE1-217ENST00000439669 CCDC144BQ3MJ40 725 aa27.95■■■□□ 2.06
CPNE1-217ENST00000439669 ZNF654Q8IZM8 581 aa27.95■■■□□ 2.06
CPNE1-217ENST00000439669 DDX49Q9Y6V7 483 aaKnown RBP27.95■■■□□ 2.06
CPNE1-217ENST00000439669 CCDC69A6NI79 296 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 DDAH1O94760 285 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 RNF180Q86T96 592 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 HOMER1Q86YM7 354 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 MYL10Q9BUA6 226 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 LRRC2Q9BYS8 371 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 KATNBL1Q9H079 304 aa27.94■■■□□ 2.06
CPNE1-217ENST00000439669 MYH6P13533 1939 aa27.93■■■□□ 2.06
CPNE1-217ENST00000439669 ALDH5A1P51649 535 aaPredicted RBP27.93■■■□□ 2.06
CPNE1-217ENST00000439669 LRRC26Q2I0M4 334 aa27.93■■■□□ 2.06
CPNE1-217ENST00000439669 EEPD1Q7L9B9 569 aa27.93■■■□□ 2.06
CPNE1-217ENST00000439669 TMTC2Q8N394 836 aa27.93■■■□□ 2.06
CPNE1-217ENST00000439669 CTCFLQ8NI51 663 aaPredicted RBP27.93■■■□□ 2.06
CPNE1-217ENST00000439669 NEK1Q96PY6 1258 aa27.93■■■□□ 2.06
CPNE1-217ENST00000439669 AMNQ9BXJ7 453 aa27.93■■■□□ 2.06
CPNE1-217ENST00000439669 MRPL11Q9Y3B7 192 aaKnown RBP27.93■■■□□ 2.06
CPNE1-217ENST00000439669 ZBTB5O15062 677 aa27.92■■■□□ 2.06
CPNE1-217ENST00000439669 ATN1P54259 1190 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-217ENST00000439669 FBXO16Q8IX29 292 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-217ENST00000439669 RASEFQ8IZ41 740 aa27.92■■■□□ 2.06
CPNE1-217ENST00000439669 MTMR8Q96EF0 704 aa27.92■■■□□ 2.06
CPNE1-217ENST00000439669 SYNRGQ9UMZ2 1314 aa27.92■■■□□ 2.06
CPNE1-217ENST00000439669 DUSP11O75319 330 aaKnown RBP27.91■■■□□ 2.06
CPNE1-217ENST00000439669 KIF5BP33176 963 aa27.91■■■□□ 2.06
CPNE1-217ENST00000439669 KRT32Q14532 448 aa27.91■■■□□ 2.06
CPNE1-217ENST00000439669 SLC35G1Q2M3R5 365 aa27.91■■■□□ 2.06
CPNE1-217ENST00000439669 NOL8Q76FK4 1167 aaKnown RBP27.91■■■□□ 2.06
CPNE1-217ENST00000439669 MCF2L2Q86YR7 1114 aa27.91■■■□□ 2.06
CPNE1-217ENST00000439669 LRRC37A2A6NM11 1700 aa27.91■■■□□ 2.06
CPNE1-217ENST00000439669 ADCY6O43306 1168 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 ADAMTS4O75173 837 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 REC8O95072 547 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 ADCYAP1R1P41586 468 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 LIFRP42702 1097 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 RGS22Q8NE09 1264 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 FERMT2Q96AC1 680 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 PIGSQ96S52 555 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 MPHOSPH6Q99547 160 aaKnown RBP27.9■■■□□ 2.06
CPNE1-217ENST00000439669 MAP3K14Q99558 947 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 RIOX1Q9H6W3 641 aa27.9■■■□□ 2.06
CPNE1-217ENST00000439669 LOC102724159A0A0B4J2E5 919 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 TNFAIP2Q03169 654 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 PWP2Q15269 919 aaKnown RBP27.89■■■□□ 2.06
CPNE1-217ENST00000439669 ADCK5Q3MIX3 580 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms