RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CST5P28325 142 aaPredicted RBP23.87■■□□□ 1.41
NCKIPSD-206ENST00000439518 KCNA10Q16322 511 aa23.87■■□□□ 1.41
NCKIPSD-206ENST00000439518 ZKSCAN3Q9BRR0 538 aa23.87■■□□□ 1.41
NCKIPSD-206ENST00000439518 CTNNA3Q9UI47 895 aa23.87■■□□□ 1.41
NCKIPSD-206ENST00000439518 MYADML2A6NDP7 307 aa23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 MOXD2PA6NHM9 499 aa23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 GJA9P57773 515 aa23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 IRX5P78411 483 aaPredicted RBP23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 GPR153Q6NV75 609 aa23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 ANKS1AQ92625 1134 aa23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 LTBP2Q14767 1821 aa23.86■■□□□ 1.41
NCKIPSD-206ENST00000439518 TRIM43BA6NCK2 446 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 NKX3-2P78367 333 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 IMMTQ16891 758 aaKnown RBP23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 CCDC178Q5BJE1 867 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 NSMFQ6X4W1 530 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 SH3RF1Q7Z6J0 888 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 IQCA1Q86XH1 822 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 TRIM43Q96BQ3 446 aaPredicted RBP23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 PRDM5Q9NQX1 630 aaPredicted RBP23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 ZSWIM5Q9P217 1185 aa23.85■■□□□ 1.41
NCKIPSD-206ENST00000439518 B4E1Z4 1266 aa23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 NFIBO00712 420 aa23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 CTAGE5O15320 804 aa23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 C6orf222P0C671 652 aaPredicted RBP23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 GPATCH4Q5T3I0 446 aaKnown RBP23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 MORC4Q8TE76 937 aa23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 NUP133Q8WUM0 1156 aa23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 PNMA2Q9UL42 364 aa23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 DDX49Q9Y6V7 483 aaKnown RBP23.84■■□□□ 1.41
NCKIPSD-206ENST00000439518 BAATQ14032 418 aaPredicted RBP23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 ANKRD33Q7Z3H0 272 aa23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 PCSK9Q8NBP7 692 aaKnown RBP23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 PNMA1Q8ND90 353 aa23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 CLEC4DQ8WXI8 215 aa23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 PURBQ96QR8 312 aaKnown RBP23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 ZSCAN10Q96SZ4 725 aaPredicted RBP23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 SPC25Q9HBM1 224 aa23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 STARD7Q9NQZ5 370 aa23.83■■□□□ 1.41
NCKIPSD-206ENST00000439518 WDR19Q8NEZ3 1342 aa23.83■■□□□ 1.4
NCKIPSD-206ENST00000439518 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 TNFAIP2Q03169 654 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 GNASQ5JWF2 1037 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 BADQ92934 168 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 TOX2Q96NM4 488 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 KRT23Q9C075 422 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 LCTP09848 1927 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 ELP1O95163 1332 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 RAD50Q92878 1312 aa23.82■■□□□ 1.4
NCKIPSD-206ENST00000439518 PQBP1O60828 265 aaKnown RBP23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 ASGR1P07306 291 aa23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 CLTBP09497 229 aa23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 GOLGA8HP0CJ92 632 aa23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 TAPT1Q6NXT6 567 aa23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 KAT14Q9H8E8 782 aa23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 CNNM2Q9H8M5 875 aa23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 GNEQ9Y223 722 aaKnown RBP23.81■■□□□ 1.4
NCKIPSD-206ENST00000439518 LAMA2P24043 3122 aaKnown RBP23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 LRRC37A2A6NM11 1700 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 KIAA0355O15063 1070 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 CHMLP26374 656 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 GLT1D1Q96MS3 346 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 UBA5Q9GZZ9 404 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 VTA1Q9NP79 307 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 PDGFCQ9NRA1 345 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 ADD3Q9UEY8 706 aaKnown RBP23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 TNKSO95271 1327 aa23.8■■□□□ 1.4
NCKIPSD-206ENST00000439518 LOC102724159A0A0B4J2E5 919 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 ITGB8P26012 769 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 CDK7P50613 346 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 FAAP100Q0VG06 881 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 PWP2Q15269 919 aaKnown RBP23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 IQSEC1Q6DN90 963 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 SLC30A10Q6XR72 485 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 FBXO16Q8IX29 292 aaPredicted RBP23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 CPVLQ9H3G5 476 aa23.79■■□□□ 1.4
NCKIPSD-206ENST00000439518 PTPDC1A2A3K4 754 aa23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 DCDC2CA8MYV0 355 aa23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 SMPD1P17405 629 aa23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 ALDH5A1P51649 535 aaPredicted RBP23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 NOL8Q76FK4 1167 aaKnown RBP23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 EEPD1Q7L9B9 569 aa23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 RUFY2Q8WXA3 655 aa23.78■■□□□ 1.4
NCKIPSD-206ENST00000439518 BEX3Q00994 111 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 SHHQ15465 462 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 ASPRV1Q53RT3 343 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 RNF207Q6ZRF8 634 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 TLK2Q86UE8 772 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 UBAC1Q9BSL1 405 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 TMEM39AQ9NV64 488 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 Q9Y3F1 56 aa23.77■■□□□ 1.4
NCKIPSD-206ENST00000439518 PTGS1P23219 599 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 CALML3P27482 149 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 RPS6P62753 249 aaKnown RBP23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 PTH1RQ03431 593 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 SEC23AQ15436 765 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 C9orf50Q5SZB4 431 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 TMEM63BQ5T3F8 832 aa23.76■■□□□ 1.39
NCKIPSD-206ENST00000439518 ADGRF4Q8IZF3 695 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms