RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 DCDC2CA8MYV0 355 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 PDHBP11177 359 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 CST5P28325 142 aaPredicted RBP21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 NT5C2P49902 561 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 TNFAIP2Q03169 654 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 GNASQ5JWF2 1037 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 SH3RF1Q7Z6J0 888 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 IQCA1Q86XH1 822 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 PNMA2Q9UL42 364 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 NEDD4P46934 1319 aa21.68■■□□□ 1.06
AC004540.1-201ENST00000439120 TRIM43BA6NCK2 446 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 MYADML2A6NDP7 307 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 ASGR1P07306 291 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 RAG1P15918 1043 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 GJA9P57773 515 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 IMMTQ16891 758 aaKnown RBP21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 CCDC178Q5BJE1 867 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 TRIM43Q96BQ3 446 aaPredicted RBP21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 ZKSCAN3Q9BRR0 538 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 UPF3AQ9H1J1 476 aaKnown RBP21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 TMEM39AQ9NV64 488 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 CTNNA3Q9UI47 895 aa21.67■■□□□ 1.06
AC004540.1-201ENST00000439120 MROH7Q68CQ1 1323 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 PTPDC1A2A3K4 754 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 ADCY6O43306 1168 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 ZNF543Q08ER8 600 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 Q7L0L9 218 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 DSCC1Q9BVC3 393 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 KATNBL1Q9H079 304 aa21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 ADD3Q9UEY8 706 aaKnown RBP21.66■■□□□ 1.06
AC004540.1-201ENST00000439120 ELP1O95163 1332 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 KDM4AO75164 1064 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 GPATCH4Q5T3I0 446 aaKnown RBP21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 CCSAPQ6IQ19 270 aaPredicted RBP21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 EEPD1Q7L9B9 569 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 ANKRD33Q7Z3H0 272 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 DGKHQ86XP1 1220 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 TOX2Q96NM4 488 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 AP5M1Q9H0R1 490 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 KAT14Q9H8E8 782 aa21.65■■□□□ 1.06
AC004540.1-201ENST00000439120 LRRC37A2A6NM11 1700 aa21.64■■□□□ 1.06
AC004540.1-201ENST00000439120 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 KIAA0355O15063 1070 aa21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 IRX5P78411 483 aaPredicted RBP21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 BAATQ14032 418 aaPredicted RBP21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 SHHQ15465 462 aa21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 TLK2Q86UE8 772 aa21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 FBXO16Q8IX29 292 aaPredicted RBP21.64■■□□□ 1.05
AC004540.1-201ENST00000439120 A0A0U1RQG5 324 aaPredicted RBP21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 B4E1Z4 1266 aa21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 NFIBO00712 420 aa21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 SNHG28P0DPA3 235 aa21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 FAAP100Q0VG06 881 aa21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 PNMA1Q8ND90 353 aa21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 MPHOSPH6Q99547 160 aaKnown RBP21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 VTA1Q9NP79 307 aa21.63■■□□□ 1.05
AC004540.1-201ENST00000439120 ASTN1O14525 1302 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 ZEB2O60315 1214 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 GOLGA8HP0CJ92 632 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 CALML3P27482 149 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 BEX3Q00994 111 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 IQSEC1Q6DN90 963 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 PURBQ96QR8 312 aaKnown RBP21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 ZSCAN10Q96SZ4 725 aaPredicted RBP21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 KRT23Q9C075 422 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 CNNM2Q9H8M5 875 aa21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 DDX49Q9Y6V7 483 aaKnown RBP21.62■■□□□ 1.05
AC004540.1-201ENST00000439120 WDR19Q8NEZ3 1342 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 LCTP09848 1927 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 TLR3O15455 904 aaKnown RBP21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 ALDH5A1P51649 535 aaPredicted RBP21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 FPGSQ05932 587 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 FSCN1Q16658 493 aaKnown RBP21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 C9orf50Q5SZB4 431 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 TTC22Q5TAA0 569 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 RNF207Q6ZRF8 634 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 KIAA1211Q6ZU35 1233 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 UBAC1Q9BSL1 405 aa21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 GNEQ9Y223 722 aaKnown RBP21.61■■□□□ 1.05
AC004540.1-201ENST00000439120 LOC102724159A0A0B4J2E5 919 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 ARVCFO00192 962 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 DYNC1LI2O43237 492 aaPredicted RBP21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 SMPD1P17405 629 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 ITGB8P26012 769 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 PWP2Q15269 919 aaKnown RBP21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 USH1GQ495M9 461 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 SLC30A10Q6XR72 485 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 RUFY2Q8WXA3 655 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 PDGFCQ9NRA1 345 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 MTMR10Q9NXD2 777 aa21.6■■□□□ 1.05
AC004540.1-201ENST00000439120 TNKSO95271 1327 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 DHX16O60231 1041 aaKnown RBP21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 CABYRO75952 493 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 PDE4AP27815 886 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 NKX3-2P78367 333 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 ASPRV1Q53RT3 343 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 ZNF697Q5TEC3 545 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 TAPT1Q6NXT6 567 aa21.59■■□□□ 1.05
AC004540.1-201ENST00000439120 CXCL17Q6UXB2 119 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms