RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 FAM84BQ96KN1 310 aaPredicted RBP13.81□□□□□ -0.2
TMEM116-202ENST00000437003 HAUS4Q9H6D7 363 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 ROBO1Q9Y6N7 1651 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 TARSL2A2RTX5 802 aaKnown RBP13.81□□□□□ -0.2
TMEM116-202ENST00000437003 USP17L12C9JPN9 530 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 USP17L21D6R901 530 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 ZEB2O60315 1214 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 IDEP14735 1019 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 PPARDQ03181 441 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 CKAP4Q07065 602 aaKnown RBP13.81□□□□□ -0.2
TMEM116-202ENST00000437003 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
TMEM116-202ENST00000437003 TTC38Q5R3I4 469 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 KCTD16Q68DU8 428 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 SMIM5Q71RC9 77 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 KCTD17Q8N5Z5 321 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 ARL8AQ96BM9 186 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 PSMB7Q99436 277 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 LACRTQ9GZZ8 138 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 TAF1P21675 1872 aa13.81□□□□□ -0.2
TMEM116-202ENST00000437003 COL1A1P02452 1464 aaPredicted RBP13.81□□□□□ -0.2
TMEM116-202ENST00000437003 RCCD1A6NED2 376 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 SH2D3CQ8N5H7 860 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 CELF1Q92879 486 aaKnown RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 EEF2KMTQ96G04 330 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 BRIP1Q9BX63 1249 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 SEMA3EO15041 775 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 USP8P40818 1118 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 TCP11X2Q5H9J9 407 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 PAPD7Q5XG87 772 aaKnown RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 GSDMAQ96QA5 445 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 DMGDHQ9UI17 866 aaKnown RBP13.8□□□□□ -0.2
TMEM116-202ENST00000437003 FAM184BQ9ULE4 1060 aa13.8□□□□□ -0.2
TMEM116-202ENST00000437003 ADAMTS3O15072 1205 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 NLRP5P59047 1200 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 TSR1Q2NL82 804 aaKnown RBP13.79□□□□□ -0.2
TMEM116-202ENST00000437003 OR8K1Q8NGG5 319 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 NELFBQ8WX92 580 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 LUC7L2Q9Y383 392 aaKnown RBP13.79□□□□□ -0.2
TMEM116-202ENST00000437003 TRIM49BA6NDI0 452 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 TTC36A6NLP5 189 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 PRPF3O43395 683 aaKnown RBP13.79□□□□□ -0.2
TMEM116-202ENST00000437003 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 KLRK1P26718 216 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 FUT2Q10981 343 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 TROAPQ12815 778 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 PAK1Q13153 545 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 SMCR8Q8TEV9 937 aaPredicted RBP13.79□□□□□ -0.2
TMEM116-202ENST00000437003 RUFY1Q96T51 708 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
TMEM116-202ENST00000437003 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
TMEM116-202ENST00000437003 KIAA0754O94854 1291 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 SH3RF1Q7Z6J0 888 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CCDC24Q8N4L8 307 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
TMEM116-202ENST00000437003 OTUD6BQ8N6M0 293 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
TMEM116-202ENST00000437003 GDAQ9Y2T3 454 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
TMEM116-202ENST00000437003 XDHP47989 1333 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 SPATA31A5Q5VU36 1347 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 SPATA31A7Q8IWB4 1347 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 KRT86O43790 486 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CALM1P0DP23 149 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CALM2P0DP24 149 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CALM3P0DP25 149 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CYP2D6P10635 497 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 TRIM14Q14142 442 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 TTMPQ5BVD1 217 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CEP120Q8N960 986 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 TSEN2Q8NCE0 465 aaKnown RBP13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CD248Q9HCU0 757 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 LAMB2P55268 1798 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
TMEM116-202ENST00000437003 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.2
TMEM116-202ENST00000437003 PCP11498 1178 aaKnown RBP13.77□□□□□ -0.2
TMEM116-202ENST00000437003 MECOMQ03112 1051 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 TBC1D9BQ66K14 1250 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 FERMT2Q96AC1 680 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 NSUN4Q96CB9 384 aaKnown RBP13.77□□□□□ -0.2
TMEM116-202ENST00000437003 RPGRIP1Q96KN7 1286 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 EHD2Q9NZN4 543 aa13.77□□□□□ -0.2
TMEM116-202ENST00000437003 CXCR5P32302 372 aa13.77□□□□□ -0.21
TMEM116-202ENST00000437003 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.21
TMEM116-202ENST00000437003 SPAG1Q07617 926 aa13.77□□□□□ -0.21
TMEM116-202ENST00000437003 TMTC3Q6ZXV5 915 aa13.77□□□□□ -0.21
TMEM116-202ENST00000437003 FBXO33Q7Z6M2 555 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms