RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 TOP1P11387 765 aaKnown RBP10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 SDSP20132 328 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 CST5P28325 142 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 GJA9P57773 515 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 TNFAIP2Q03169 654 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 SYDE2Q5VT97 1194 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 EEPD1Q7L9B9 569 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 ANKRD33Q7Z3H0 272 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 PLEKHM2Q8IWE5 1019 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 PCSK9Q8NBP7 692 aaKnown RBP10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 GLT1D1Q96MS3 346 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 UPF3AQ9H1J1 476 aaKnown RBP10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 RANBP17Q9H2T7 1088 aaKnown RBP10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 CYP39A1Q9NYL5 469 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 ASTN1O14525 1302 aa10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 COL11A1P12107 1806 aaPredicted RBP10.49□□□□□ -0.73
CTDSPL-205ENST00000436654 NFIBO00712 420 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 CTAGE5O15320 804 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 PDHBP11177 359 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 NUCB1Q02818 461 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 AAMPQ13685 434 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 BAATQ14032 418 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 AKNAD1Q5T1N1 836 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 TMEM63BQ5T3F8 832 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 ZNF697Q5TEC3 545 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 FAM109BQ6ICB4 259 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 BTNL9Q6UXG8 535 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 MFSD6Q6ZSS7 791 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 FBXO16Q8IX29 292 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 TOX2Q96NM4 488 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 ZKSCAN3Q9BRR0 538 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 TCP11L1Q9NUJ3 509 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 ELP1O95163 1332 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 ZMYM6O95789 1325 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 NEDD4P46934 1319 aa10.48□□□□□ -0.73
CTDSPL-205ENST00000436654 A0A0U1RQG5 324 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 PTPDC1A2A3K4 754 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 ARVCFO00192 962 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 DYNC1LI2O43237 492 aaPredicted RBP10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 SMPD1P17405 629 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 MFAP1P55081 439 aaKnown RBP10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 FPGSQ05932 587 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 CXCL17Q6UXB2 119 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 TLK2Q86UE8 772 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 TICAM2Q86XR7 235 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 TBX21Q9UL17 535 aa10.47□□□□□ -0.73
CTDSPL-205ENST00000436654 ZNF213O14771 459 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 TIMP1P01033 207 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 CALML3P27482 149 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 CDK7P50613 346 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 ZNF543Q08ER8 600 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 FSCN1Q16658 493 aaKnown RBP10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 TAPT1Q6NXT6 567 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 SLC30A10Q6XR72 485 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 ESR2Q92731 530 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 PPP1R12CQ9BZL4 782 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 RNF41Q9H4P4 317 aaPredicted RBP10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 GNEQ9Y223 722 aaKnown RBP10.46□□□□□ -0.73
CTDSPL-205ENST00000436654 VCANP13611 3396 aa10.46□□□□□ -0.74
CTDSPL-205ENST00000436654 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 TLR3O15455 904 aaKnown RBP10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 KDM4AO75164 1064 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 ALDH5A1P51649 535 aaPredicted RBP10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 PSMC6P62333 389 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 SMAD3P84022 425 aaKnown RBP10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 IQSEC1Q6DN90 963 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 FAM126BQ8IXS8 530 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 CLEC4DQ8WXI8 215 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 TTC14Q96N46 770 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 UBA5Q9GZZ9 404 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 VTA1Q9NP79 307 aa10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 ADD3Q9UEY8 706 aaKnown RBP10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 SPTBN5Q9NRC6 3674 aaKnown RBP10.45□□□□□ -0.74
CTDSPL-205ENST00000436654 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 B4E1Z4 1266 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 ZEB2O60315 1214 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 SNHG28P0DPA3 235 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 ACRP10323 421 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 PCP11498 1178 aaKnown RBP10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 CSF2RAP15509 400 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 CYP2C18P33260 490 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 NKX3-2P78367 333 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 PPIGQ13427 754 aaKnown RBP eCLIP10.44□□□□□ -0.745e-8■■■■■ 31.2
CTDSPL-205ENST00000436654 ITGA7Q13683 1181 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 USH1GQ495M9 461 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 MFSD5Q6N075 450 aa10.44□□□□□ -0.74
CTDSPL-205ENST00000436654 RNF207Q6ZRF8 634 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms