RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 KCNAB2Q13303 367 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 ACBD5Q5T8D3 534 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 RNF111Q6ZNA4 994 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 FAM214BQ7L5A3 538 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 TMPRSS7Q7RTY8 843 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 TSPYL5Q86VY4 417 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 PPIL6Q8IXY8 311 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 IFNL3Q8IZI9 196 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 NAT16Q8N8M0 369 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 PANK1Q8TE04 598 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 GATA6Q92908 595 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 ALG1Q9BT22 464 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 LGR4Q9BXB1 951 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
HMGB1P45-201ENST00000435986 WDR64B1ANS9 1081 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 ALG1L2C9J202 215 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 STXBP3O00186 592 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 GSTA4O15217 222 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 TBC1D8O95759 1140 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 CEACAM5P06731 702 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 SYPP08247 313 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 GSTM1P09488 218 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 SRFP11831 508 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 VAV1P15498 845 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 PAMP19021 973 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 LTKP29376 864 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 SART3Q15020 963 aaKnown RBP6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 IFI16Q16666 785 aaKnown RBP6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 SLC35F1Q5T1Q4 408 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 STYK1Q6J9G0 422 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 RCSD1Q6JBY9 416 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 CRTC3Q6UUV7 619 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 BRAPQ7Z569 592 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 DDX53Q86TM3 631 aaKnown RBP6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 THNSL2Q86YJ6 484 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 PRPF38AQ8NAV1 312 aaKnown RBP6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 LINC00116Q8NCU8 138 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 ATL2Q8NHH9 583 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 DDX1Q92499 740 aaKnown RBP6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 SLC52A2Q9HAB3 445 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 LRRC4CQ9HCJ2 640 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 HOMER2Q9NSB8 354 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 ZSWIM5Q9P217 1185 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 DUSP13Q9UII6 198 aa6.24□□□□□ -1.41
HMGB1P45-201ENST00000435986 PRR33A8MZF0 331 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 CYP26A1O43174 497 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 RAB11FIP3O75154 756 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 F13BP05160 661 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 PMLP29590 882 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 LTBRP36941 435 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 AMPD3Q01432 767 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 GUCY1A3Q02108 690 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 CFAP100Q494V2 611 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 CYP2R1Q6VVX0 501 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 GSTCDQ8NEC7 633 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 NETO1Q8TDF5 533 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 DIO2Q92813 273 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 COPS5Q92905 334 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 UBE2FQ969M7 185 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 DUSP15Q9H1R2 295 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 GPR27Q9NS67 375 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 TCFL5Q9UL49 500 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 ATP8A1Q9Y2Q0 1164 aa6.23□□□□□ -1.41
HMGB1P45-201ENST00000435986 A0A087X0B3 334 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 NPHP3-ACAD11A0A0J9YXS1 232 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 SCO2A0A1W2PP80 73 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 SHISA3A0PJX4 238 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 ZNF205O95201 554 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 THBDP07204 575 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 C6orf222P0C671 652 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 GTF2A2P52657 109 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 OXCT1P55809 520 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 LRP8Q14114 963 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 SF1Q15637 639 aaKnown RBP6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 ARTNQ5T4W7 220 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 FERMT3Q86UX7 667 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 ANKLE2Q86XL3 938 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 SLC7A14Q8TBB6 771 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 LEO1Q8WVC0 666 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 ASB11Q8WXH4 323 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 WNK4Q96J92 1243 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 FCRL3Q96P31 734 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 PHF20Q9BVI0 1012 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 CDADC1Q9BWV3 514 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 TRIM39Q9HCM9 518 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 DDX56Q9NY93 547 aaKnown RBP6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 CNTNAP4Q9C0A0 1308 aa6.22□□□□□ -1.41
HMGB1P45-201ENST00000435986 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 GSG1L2A8MUP6 293 aa6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 H3BS24 57 aa6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 BRINP1O60477 761 aa6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 S100BP04271 92 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 POU3F2P20265 443 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 CTSKP43235 329 aa6.21□□□□□ -1.42
HMGB1P45-201ENST00000435986 SCNN1BP51168 640 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms