RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 IL17REQ8NFR9 667 aa24.58■■□□□ 1.53
TOP2B-204ENST00000435706 BZW2Q9Y6E2 419 aaKnown RBP24.58■■□□□ 1.53
TOP2B-204ENST00000435706 RAB20Q9NX57 234 aa24.58■■□□□ 1.53
TOP2B-204ENST00000435706 HMGB1P1B2RPK0 211 aaPredicted RBP24.58■■□□□ 1.53
TOP2B-204ENST00000435706 CCDC144BQ3MJ40 725 aa24.58■■□□□ 1.53
TOP2B-204ENST00000435706 ZNF658Q5TYW1 1059 aaPredicted RBP24.58■■□□□ 1.53
TOP2B-204ENST00000435706 EMBQ6PCB8 327 aa24.58■■□□□ 1.53
TOP2B-204ENST00000435706 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
TOP2B-204ENST00000435706 NHEJ1Q9H9Q4 299 aaPredicted RBP24.58■■□□□ 1.53
TOP2B-204ENST00000435706 NOVA2Q9UNW9 492 aaKnown RBP24.58■■□□□ 1.53
TOP2B-204ENST00000435706 MYOM2P54296 1465 aa24.58■■□□□ 1.53
TOP2B-204ENST00000435706 DIXDC1Q155Q3 683 aa24.58■■□□□ 1.52
TOP2B-204ENST00000435706 TOGARAM2Q6ZUX3 1019 aa24.58■■□□□ 1.52
TOP2B-204ENST00000435706 FMNL1O95466 1100 aaPredicted RBP24.57■■□□□ 1.52
TOP2B-204ENST00000435706 SLC7A5Q01650 507 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 FAM26FQ5R3K3 315 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 APOA5Q6Q788 366 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 NEK8Q86SG6 692 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 RWDD2AQ9UIY3 292 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 DBNLQ9UJU6 430 aaKnown RBP24.57■■□□□ 1.52
TOP2B-204ENST00000435706 ABCC10Q5T3U5 1492 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 USP27XA6NNY8 438 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 P2RX5Q93086 422 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 METTL14Q9HCE5 456 aaKnown RBP24.57■■□□□ 1.52
TOP2B-204ENST00000435706 ARPP21Q9UBL0 812 aaPredicted RBP24.57■■□□□ 1.52
TOP2B-204ENST00000435706 CHUKO15111 745 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 KCNQ3O43525 872 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 MAGOHBQ96A72 148 aaKnown RBP24.57■■□□□ 1.52
TOP2B-204ENST00000435706 SYNMO15061 1565 aa24.57■■□□□ 1.52
TOP2B-204ENST00000435706 MFAP3LO75121 409 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 OGFOD1Q8N543 542 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 PLTPP55058 493 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 PPP2R5DQ14738 602 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 GPKOWQ92917 476 aaPredicted RBP eCLIP24.56■■□□□ 1.525e-6■□□□□ 11.3
TOP2B-204ENST00000435706 ZCCHC17Q9NP64 241 aaKnown RBP24.56■■□□□ 1.52
TOP2B-204ENST00000435706 PFDN4Q9NQP4 134 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 WDR7Q9Y4E6 1490 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 DDX39AO00148 427 aaKnown RBP24.56■■□□□ 1.52
TOP2B-204ENST00000435706 PDCLQ13371 301 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 HSP90AA5PQ58FG0 334 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 PTPN22Q9Y2R2 807 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 USP17L12C9JPN9 530 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 USP17L21D6R901 530 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 FTCDO95954 541 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 ZBED6P86452 979 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 GALNT17Q6IS24 598 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 SCYL3Q8IZE3 742 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 SCOCQ9UIL1 159 aa24.56■■□□□ 1.52
TOP2B-204ENST00000435706 DDAH1O94760 285 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 SERPINB6P35237 376 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 RNASELQ05823 741 aaKnown RBP24.55■■□□□ 1.52
TOP2B-204ENST00000435706 EXOC3L4Q17RC7 722 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 COPRSQ9NQ92 184 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 RIMBP2O15034 1052 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 SLC1A4P43007 532 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 CUEDC2Q9H467 287 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 SPZ1Q9BXG8 430 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 TXLNGQ9NUQ3 528 aa24.55■■□□□ 1.52
TOP2B-204ENST00000435706 MAN1A1P33908 653 aa24.54■■□□□ 1.52
TOP2B-204ENST00000435706 OSBPL5Q9H0X9 879 aaPredicted RBP24.54■■□□□ 1.52
TOP2B-204ENST00000435706 ATP8A2Q9NTI2 1148 aa24.54■■□□□ 1.52
TOP2B-204ENST00000435706 CD19P15391 556 aa24.54■■□□□ 1.52
TOP2B-204ENST00000435706 NECTIN1Q15223 517 aa24.54■■□□□ 1.52
TOP2B-204ENST00000435706 TPH2Q8IWU9 490 aa24.54■■□□□ 1.52
TOP2B-204ENST00000435706 DAPK3O43293 454 aa24.54■■□□□ 1.52
TOP2B-204ENST00000435706 ARHGEF18Q6ZSZ5 1173 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 PCDHA12Q9UN75 941 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 TRAPPC10P48553 1259 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 MAN2A1Q16706 1144 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 TSPYL2Q9H2G4 693 aaPredicted RBP24.53■■□□□ 1.52
TOP2B-204ENST00000435706 POC1B-GALNT4F8VUJ3 575 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 EIF4A3P38919 411 aaKnown RBP24.53■■□□□ 1.52
TOP2B-204ENST00000435706 MAPKAPK5Q8IW41 473 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 PBKQ96KB5 322 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 PCDHA13Q9Y5I0 950 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 POLE2P56282 527 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 LRRC24Q50LG9 513 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 MYCNP04198 464 aaPredicted RBP24.53■■□□□ 1.52
TOP2B-204ENST00000435706 LMNB1P20700 586 aa24.53■■□□□ 1.52
TOP2B-204ENST00000435706 MIER3Q7Z3K6 550 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 NFU1Q9UMS0 254 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 N4BP1O75113 896 aaKnown RBP24.52■■□□□ 1.52
TOP2B-204ENST00000435706 ATF7P17544 494 aaPredicted RBP24.52■■□□□ 1.52
TOP2B-204ENST00000435706 CYP27A1Q02318 531 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 GABPB2Q8TAK5 448 aaPredicted RBP24.52■■□□□ 1.52
TOP2B-204ENST00000435706 GGCXP38435 758 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 USH1GQ495M9 461 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 TBC1D1Q86TI0 1168 aaPredicted RBP24.52■■□□□ 1.52
TOP2B-204ENST00000435706 CCHCR1Q8TD31 782 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 SDR42E1Q8WUS8 393 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 RNF26Q9BY78 433 aaPredicted RBP24.52■■□□□ 1.52
TOP2B-204ENST00000435706 TFCP2L1Q9NZI6 479 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 NOP53Q9NZM5 478 aaKnown RBP24.52■■□□□ 1.52
TOP2B-204ENST00000435706 ZDHHC9Q9Y397 364 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 ADCY1Q08828 1119 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 ANKRD35Q8N283 1001 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 PGBD1Q96JS3 809 aa24.52■■□□□ 1.52
TOP2B-204ENST00000435706 SH2D4AQ9H788 454 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms