RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 DUSP9Q99956 384 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 UBXN6Q9BZV1 441 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TRIM9Q9C026 710 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 EPC1Q9H2F5 836 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 RIOX1Q9H6W3 641 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MYH1P12882 1939 aa18.06■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CAPN11Q9UMQ6 739 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MTMR7Q9Y216 660 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 FOCADQ5VW36 1801 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TTC26A0AVF1 554 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 hCG_1984214I3L0E3 225 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SLC35F6Q8N357 371 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 ZNF713Q8N859 430 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MMTAG2Q9BU76 263 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PARD6BQ9BYG5 372 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 USP21Q9UK80 565 aa18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 REXO2Q9Y3B8 237 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MYH8P13535 1937 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CTAGE9A4FU28 777 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SRGNP10124 158 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CCNE1P24864 410 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CHMP4BP1P59074 171 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 LETM2Q2VYF4 491 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 JAKMIP3Q5VZ66 844 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CREBRFQ8IUR6 639 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CEP112Q8N8E3 955 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 OR8K1Q8NGG5 319 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PKNOX2Q96KN3 472 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TRIM47Q96LD4 638 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PLIN2Q99541 437 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 LRRC4BQ9NT99 713 aa18.04■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CCNT1O60563 726 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 BBOX1O75936 387 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 ABL1P00519 1130 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PPP1R2P41236 205 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 DNM2P50570 870 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TUBB4BP68371 445 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 P2RX5Q93086 422 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 RBM17Q96I25 401 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PIGSQ96S52 555 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CHP1Q99653 195 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TTYH3Q9C0H2 523 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 ST7Q9NRC1 585 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SEC63Q9UGP8 760 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 EPN1Q9Y6I3 576 aaPredicted RBP18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SEC31AO94979 1220 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 NDUFA10O95299 355 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 GYS1P13807 737 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 GABPAQ06546 454 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MEA1Q16626 185 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 ZNF662Q6ZS27 426 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TBC1D16Q8TBP0 767 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MTMR9Q96QG7 549 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 POLLQ9UGP5 575 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
HLA-DQB2-231ENST00000435145 C10orf71Q711Q0 1435 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 BICDL2A1A5D9 508 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 USP17L5A8MUK1 530 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SNHG28P0DPA3 235 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 PDHBP11177 359 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 TBCKQ8TEA7 893 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CCDC47Q96A33 483 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 NAPGQ99747 312 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 SLF1Q9BQI6 1058 aa18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 LUC7L2Q9Y383 392 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB2-231ENST00000435145 CCDC151A5D8V7 595 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 SASH3O75995 380 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 SERPINB2P05120 415 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 ST5P78524 1137 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 AMPD2Q01433 879 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 BRD3Q15059 726 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 WDR59Q6PJI9 974 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 CSGALNACT2Q8N6G5 542 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 RETREG2Q8NC44 543 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 MSANTD4Q8NCY6 345 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 TUBGCP2Q9BSJ2 902 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 EXOC1Q9NV70 894 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 RASSF10A6NK89 507 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 EDIL3O43854 480 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 AMPD3Q01432 767 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 PDE4DQ08499 809 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 STK4Q13043 487 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 WHAMMP3Q1A5X7 153 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 KIF4BQ2VIQ3 1234 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 ZSCAN29Q8IWY8 852 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 ANKZF1Q9H8Y5 726 aa18.01■□□□□ 0.47
HLA-DQB2-231ENST00000435145 ARFGAP3Q9NP61 516 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms