RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 GUCY1A3Q02108 690 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 SF1Q15637 639 aaKnown RBP8.21□□□□□ -1.1
USP54-206ENST00000433394 SLC35F1Q5T1Q4 408 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 ACBD5Q5T8D3 534 aaPredicted RBP8.21□□□□□ -1.1
USP54-206ENST00000433394 STYK1Q6J9G0 422 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 RCSD1Q6JBY9 416 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 IFNL3Q8IZI9 196 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 HOMER2Q9NSB8 354 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 ZSWIM5Q9P217 1185 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 DUSP13Q9UII6 198 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 TCFL5Q9UL49 500 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 ATP8A1Q9Y2Q0 1164 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
USP54-206ENST00000433394 TMEM265A0A087WTH1 108 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 A0A087X0B3 334 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 SHISA3A0PJX4 238 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 BLACEA4D250 179 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 ALG1L2C9J202 215 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 TBC1D8O95759 1140 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 F13BP05160 661 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 CEACAM5P06731 702 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 THBDP07204 575 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 C6orf222P0C671 652 aaPredicted RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 VAV1P15498 845 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 PAMP19021 973 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 LTBRP36941 435 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 SART3Q15020 963 aaKnown RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 IFI16Q16666 785 aaKnown RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 CFAP100Q494V2 611 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 RNF111Q6ZNA4 994 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 DDX53Q86TM3 631 aaKnown RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 SLC51AQ86UW1 340 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 FERMT3Q86UX7 667 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 LINC00116Q8NCU8 138 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 SLC7A14Q8TBB6 771 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 LEO1Q8WVC0 666 aaPredicted RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 DDX1Q92499 740 aaKnown RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 DIO2Q92813 273 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 TARS2Q9BW92 718 aaKnown RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 CDADC1Q9BWV3 514 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 DDX56Q9NY93 547 aaKnown RBP8.2□□□□□ -1.1
USP54-206ENST00000433394 MINPP1Q9UNW1 487 aa8.2□□□□□ -1.1
USP54-206ENST00000433394 NPHP3-ACAD11A0A0J9YXS1 232 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 H3BS24 57 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 CYP26A1O43174 497 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 IGLV1-40P01703 118 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 SRFP11831 508 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 CTSKP43235 329 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 OXCT1P55809 520 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 PRSS53Q2L4Q9 553 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 NETO1Q8TDF5 533 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 PANK1Q8TE04 598 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 COPS5Q92905 334 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 UBE2FQ969M7 185 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 FCRL3Q96P31 734 aaPredicted RBP8.19□□□□□ -1.1
USP54-206ENST00000433394 PHF20Q9BVI0 1012 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 DUSP15Q9H1R2 295 aaPredicted RBP8.19□□□□□ -1.1
USP54-206ENST00000433394 TRIM39Q9HCM9 518 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 GPR27Q9NS67 375 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 SNX11Q9Y5W9 270 aa8.19□□□□□ -1.1
USP54-206ENST00000433394 GSG1L2A8MUP6 293 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 GSTA4O15217 222 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 ZNF205O95201 554 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 SDSP20132 328 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 GPR85P60893 370 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 CYP2R1Q6VVX0 501 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 FAM181AQ8N9Y4 354 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP54-206ENST00000433394 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 HSPA12BQ96MM6 686 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 SLC12A9Q9BXP2 914 aa8.18□□□□□ -1.1
USP54-206ENST00000433394 TNPO3Q9Y5L0 923 aaKnown RBP8.18□□□□□ -1.1
USP54-206ENST00000433394 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.17□□□□□ -1.1
USP54-206ENST00000433394 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
USP54-206ENST00000433394 CRTAMO95727 393 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 H2AFB1P0C5Y9 115 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 H2AFB2P0C5Z0 115 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 JMJD7P0C870 316 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 PLS3P13797 630 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 IFNGR1P15260 489 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 PMLP29590 882 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 NTRK3Q16288 839 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 RNF180Q86T96 592 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 ZC3H7AQ8IWR0 971 aaKnown RBP8.17□□□□□ -1.1
USP54-206ENST00000433394 UBR7Q8N806 425 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 USP7Q93009 1102 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 WNK4Q96J92 1243 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 FOXP3Q9BZS1 431 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP54-206ENST00000433394 GPRC5CQ9NQ84 441 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 CLEC1BQ9P126 229 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 TRAF6Q9Y4K3 522 aa8.17□□□□□ -1.1
USP54-206ENST00000433394 FKTNO75072 461 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 FSTP19883 344 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 SCNN1BP51168 640 aa8.16□□□□□ -1.1
USP54-206ENST00000433394 GTF2A2P52657 109 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms