RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 KIFC2Q96AC6 838 aa18.24■□□□□ 0.51
SF1-208ENST00000432725 LRRC2Q9BYS8 371 aa18.24■□□□□ 0.51
SF1-208ENST00000432725 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
SF1-208ENST00000432725 ATP6V1DQ9Y5K8 247 aa18.24■□□□□ 0.51
SF1-208ENST00000432725 PFASO15067 1338 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 NID2Q14112 1375 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
SF1-208ENST00000432725 KDM4AO75164 1064 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 PGK2P07205 417 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 FDX1P10109 184 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 OAZ1P54368 228 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 CHRDL2Q6WN34 429 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 CYB5R4Q7L1T6 521 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.23■□□□□ 0.51
SF1-208ENST00000432725 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 SMARCC2Q8TAQ2 1214 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
SF1-208ENST00000432725 PRO3102Q9H379 93 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 STX8Q9UNK0 236 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 RIPK3Q9Y572 518 aa18.23■□□□□ 0.51
SF1-208ENST00000432725 KLF18A0A0U1RQI7 1052 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 TMEM232C9JQI7 657 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
SF1-208ENST00000432725 SEPT4O43236 478 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 STX6O43752 255 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 NMT2O60551 498 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 PLA2G6O60733 806 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 SCRN1Q12765 414 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 CPLX2Q6PUV4 134 aaKnown RBP18.22■□□□□ 0.51
SF1-208ENST00000432725 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 IQCA1Q86XH1 822 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
SF1-208ENST00000432725 CDKL5O76039 1030 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 SYT1P21579 422 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 SLC1A4P43007 532 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 STAT2P52630 851 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 CHST3Q7LGC8 479 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 CPXCR1Q8N123 301 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 TINF2Q9BSI4 451 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 LY9Q9HBG7 655 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 RAVER2Q9HCJ3 691 aaKnown RBP18.21■□□□□ 0.51
SF1-208ENST00000432725 TOMM22Q9NS69 142 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 TCP11L1Q9NUJ3 509 aa18.21■□□□□ 0.51
SF1-208ENST00000432725 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.51
SF1-208ENST00000432725 DNAJC25-GNG10A0A024R161 153 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 CCDC69A6NI79 296 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 DNM1LO00429 736 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
SF1-208ENST00000432725 STK3Q13188 491 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 WTAPQ15007 396 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 PRAMEF19Q5SWL8 479 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 RCSD1Q6JBY9 416 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 APOA5Q6Q788 366 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 C7orf61Q8IZ16 206 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
SF1-208ENST00000432725 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
SF1-208ENST00000432725 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 ZDHHC9Q9Y397 364 aa18.2■□□□□ 0.5
SF1-208ENST00000432725 COL11A1P12107 1806 aaPredicted RBP18.19■□□□□ 0.5
SF1-208ENST00000432725 CCDC196A0A1B0GTZ2 297 aa18.19■□□□□ 0.5
SF1-208ENST00000432725 ZBTB43O43298 467 aa18.19■□□□□ 0.5
SF1-208ENST00000432725 BAG4O95429 457 aaKnown RBP18.19■□□□□ 0.5
SF1-208ENST00000432725 FXR1P51114 621 aaKnown RBP eCLIP18.19■□□□□ 0.5
SF1-208ENST00000432725 NBR1Q14596 966 aa18.19■□□□□ 0.5
SF1-208ENST00000432725 RRP12Q5JTH9 1297 aaKnown RBP18.19■□□□□ 0.5
SF1-208ENST00000432725 LARP1BQ659C4 914 aaKnown RBP18.19■□□□□ 0.5
SF1-208ENST00000432725 ARRDC4Q8NCT1 418 aa18.19■□□□□ 0.5
SF1-208ENST00000432725 NSUN7Q8NE18 718 aaKnown RBP18.19■□□□□ 0.5
SF1-208ENST00000432725 CHST13Q8NET6 341 aa18.19■□□□□ 0.5
SF1-208ENST00000432725 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
SF1-208ENST00000432725 CPLX1O14810 134 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 CALM1P0DP23 149 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 CALM2P0DP24 149 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 CALM3P0DP25 149 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 TOP1P11387 765 aaKnown RBP18.18■□□□□ 0.5
SF1-208ENST00000432725 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
SF1-208ENST00000432725 MAMDC4Q6UXC1 1216 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 ZNF467Q7Z7K2 595 aaPredicted RBP18.18■□□□□ 0.5
SF1-208ENST00000432725 FAM184AQ8NB25 1140 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 ZSCAN10Q96SZ4 725 aaPredicted RBP18.18■□□□□ 0.5
SF1-208ENST00000432725 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 CEP290O15078 2479 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 ZNF536O15090 1300 aa18.18■□□□□ 0.5
SF1-208ENST00000432725 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
SF1-208ENST00000432725 METAP2P50579 478 aaKnown RBP eCLIP18.17■□□□□ 0.52e-8■□□□□ 10.5
SF1-208ENST00000432725 PKP1Q13835 747 aa18.17■□□□□ 0.5
SF1-208ENST00000432725 LRRC26Q2I0M4 334 aa18.17■□□□□ 0.5
SF1-208ENST00000432725 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
SF1-208ENST00000432725 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
SF1-208ENST00000432725 TMEM47Q9BQJ4 181 aa18.17■□□□□ 0.5
SF1-208ENST00000432725 SENP6Q9GZR1 1112 aaPredicted RBP18.17■□□□□ 0.5
SF1-208ENST00000432725 ISY1Q9ULR0 285 aaKnown RBP18.17■□□□□ 0.5
SF1-208ENST00000432725 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms