RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 CRKP46108 304 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 NCBP1Q09161 790 aaKnown RBP12.75□□□□□ -0.37
CLDN4-202ENST00000431918 FUT2Q10981 343 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 DPYDQ12882 1025 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 FAM207AQ9NSI2 230 aaPredicted RBP12.75□□□□□ -0.37
CLDN4-202ENST00000431918 PCDHA12Q9UN75 941 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 MYH2Q9UKX2 1941 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 NCAPH2Q6IBW4 605 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 LARGE2Q8N3Y3 721 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 ACRBPQ8NEB7 543 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 TDRD3Q9H7E2 651 aaKnown RBP12.75□□□□□ -0.37
CLDN4-202ENST00000431918 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
CLDN4-202ENST00000431918 DDX25Q9UHL0 483 aaKnown RBP12.75□□□□□ -0.37
CLDN4-202ENST00000431918 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
CLDN4-202ENST00000431918 RAD17O75943 681 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
CLDN4-202ENST00000431918 NFIAQ12857 509 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 PRR16Q569H4 304 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
CLDN4-202ENST00000431918 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 H7C1D1 291 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 ADAMTS3O15072 1205 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 CFBP00751 764 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 PPP2R3AQ06190 1150 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
CLDN4-202ENST00000431918 CAPZA3Q96KX2 299 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLDN4-202ENST00000431918 MTMR4Q9NYA4 1195 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 ATP6V0A2Q9Y487 856 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 CCDC174Q6PII3 467 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 MASTLQ96GX5 879 aa12.74□□□□□ -0.37
CLDN4-202ENST00000431918 MACROD2A1Z1Q3 448 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CTAGE9A4FU28 777 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 RHOXF2BP0C7M4 288 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 SEPT2Q15019 361 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 AOC3Q16853 763 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CCDC122Q5T0U0 273 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CCDC42Q96M95 316 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 RHOXF2Q9BQY4 288 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 MYH14Q7Z406 1995 aaKnown RBP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 BAZ2AQ9UIF9 1905 aaKnown RBP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 FAM170AA1A519 330 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CYP4A11Q02928 519 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CYP26C1Q6V0L0 522 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 RWDD2AQ9UIY3 292 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 C21orf2O43822 256 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 PDHBP11177 359 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CERKQ8TCT0 537 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 TUBGCP2Q9BSJ2 902 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 KCNQ5Q9NR82 932 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 XIRP1Q702N8 1843 aaKnown RBP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 FCER1AP12319 257 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CYLC1P35663 651 aaPredicted RBP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 MATR3P43243 847 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLDN4-202ENST00000431918 UBXN2AP68543 259 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 SYCP1Q15431 976 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 TCP11X2Q5H9J9 407 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 TMC4Q7Z404 712 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 ADGRF4Q8IZF3 695 aa12.73□□□□□ -0.37
CLDN4-202ENST00000431918 TAF1P21675 1872 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 LARP4BQ92615 738 aaKnown RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 CNOT6LQ96LI5 555 aaKnown RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 STK32BQ9NY57 414 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 GPATCH4Q5T3I0 446 aaKnown RBP12.72□□□□□ -0.37
CLDN4-202ENST00000431918 ERMNQ8TAM6 284 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 KIFC2Q96AC6 838 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 SHISA4Q96DD7 197 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 SPZ1Q9BXG8 430 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
CLDN4-202ENST00000431918 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms