RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 JAMLQ86YT9 394 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 CCDC103Q8IW40 242 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 DCAF4Q8WV16 495 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 IPO9Q96P70 1041 aaKnown RBP4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 METTL22Q9BUU2 404 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 TMEFF2Q9UIK5 374 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 ATP8A1Q9Y2Q0 1164 aa4.48□□□□□ -1.69
HMGB1P27-201ENST00000431429 TMEM82A0PJX8 343 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 C2orf71A6NGG8 1288 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 PRR19A6NJB7 356 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 GNAT3A8MTJ3 354 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 WASH4PA8MWX3 477 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 STXBP3O00186 592 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 ARVCFO00192 962 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 GSC2O15499 205 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 FGF10O15520 208 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 IGLV1-40P01703 118 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 SOX5P35711 763 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 RASSF7Q02833 373 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZNF460Q14592 562 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 SEPT7Q16181 437 aaKnown RBP4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 DPY19L1Q2PZI1 675 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 PLEKHG6Q3KR16 790 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 PLA2G4EQ3MJ16 856 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 SLC51AQ86UW1 340 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 ANKLE2Q86XL3 938 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 ZDHHC13Q8IUH4 622 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 PPM1KQ8N3J5 372 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 PRPF38AQ8NAV1 312 aaKnown RBP4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 MMP19Q99542 508 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 IRF2BPLQ9H1B7 796 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 ASCC2Q9H1I8 757 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 TRIT1Q9H3H1 467 aaKnown RBP4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 GPR27Q9NS67 375 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 GPATCH2Q9NW75 528 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 NDOR1Q9UHB4 597 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 RNF112Q9ULX5 631 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 TNPO3Q9Y5L0 923 aaKnown RBP4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 SNX11Q9Y5W9 270 aa4.47□□□□□ -1.69
HMGB1P27-201ENST00000431429 PITPNM2Q9BZ72 1349 aa4.46□□□□□ -1.69
HMGB1P27-201ENST00000431429 AQP7O14520 342 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 MSCO60682 206 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 RASGRP1O95267 797 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 ESR1P03372 595 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 PROCP04070 461 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 CD3EP07766 207 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 PDGFRBP09619 1106 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 FSTP19883 344 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 CDK11BP21127 795 aaKnown RBP4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 PMLP29590 882 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 IGFALSP35858 605 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 ECI1P42126 302 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 NOP2P46087 812 aaKnown RBP4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 GPR85P60893 370 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 TEKQ02763 1124 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 DHCR24Q15392 516 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 EEF1DP3Q658K8 133 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 ABHD17CQ6PCB6 329 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 KCNT2Q6UVM3 1135 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 RNF111Q6ZNA4 994 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 STRA8Q7Z7C7 330 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 DDX42Q86XP3 938 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 FAM181AQ8N9Y4 354 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 SHKBP1Q8TBC3 707 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 HSPA12BQ96MM6 686 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 CDIP1Q9H305 208 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 METTL14Q9HCE5 456 aaKnown RBP4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 GPRC5CQ9NQ84 441 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 TRAF6Q9Y4K3 522 aa4.46□□□□□ -1.7
HMGB1P27-201ENST00000431429 PHLDB1Q86UU1 1377 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 MEIS1O00470 390 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 CRTAMO95727 393 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 CKMP06732 381 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 TPP2P29144 1249 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 LTBRP36941 435 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 KCNJ6P48051 423 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 KCNAB2Q13303 367 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 PCBP1Q15365 356 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 RSPO4Q2I0M5 234 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 DUSP27Q5VZP5 1158 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 MBLAC2Q68D91 279 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 CWF19L1Q69YN2 538 aaKnown RBP4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 PKN3Q6P5Z2 889 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 USP53Q70EK8 1073 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 TMPRSS7Q7RTY8 843 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 WFDC3Q8IUB2 231 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 PPIL6Q8IXY8 311 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 AHI1Q8N157 1196 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 Q8N1Y9 231 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 FBXL6Q8N531 539 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 TMEM52Q8NDY8 209 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 TCFL5Q9UL49 500 aa4.45□□□□□ -1.7
HMGB1P27-201ENST00000431429 FAM155AB1AL88 458 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 WDR64B1ANS9 1081 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 MEFVO15553 781 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 SYPP08247 313 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 LCP1P13796 627 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 PLS3P13797 630 aa4.44□□□□□ -1.7
HMGB1P27-201ENST00000431429 FOSL1P15407 271 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms