RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 MAF1Q9H063 256 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 JMJD4Q9H9V9 463 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 VAT1LQ9HCJ6 419 aa20.22■□□□□ 0.83
CTDSP1-203ENST00000431127 MSCO60682 206 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 CYBAP13498 195 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 GNAQP50148 359 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 TRAF1Q13077 416 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 COL9A3Q14050 684 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 MAMDC4Q6UXC1 1216 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 JAKMIP1Q96N16 626 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 LZTS2Q9BRK4 669 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 LRRC2Q9BYS8 371 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 CRISPLD2Q9H0B8 497 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 SYNGAP1Q96PV0 1343 aa20.21■□□□□ 0.83
CTDSP1-203ENST00000431127 ZNFX1Q9P2E3 1918 aaKnown RBP20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 CNGA1P29973 690 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 CCND3P30281 292 aaPredicted RBP20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 FGD1P98174 961 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 BLOC1S2Q6QNY1 142 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 FBXO11Q86XK2 927 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 FAM133AQ8N9E0 248 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 MTMR8Q96EF0 704 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 RIOX1Q9H6W3 641 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 ABCB11O95342 1321 aa20.2■□□□□ 0.82
CTDSP1-203ENST00000431127 ZBTB5O15062 677 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 USH1GQ495M9 461 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 HABP4Q5JVS0 413 aaKnown RBP20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 CLEC4DQ8WXI8 215 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 AMNQ9BXJ7 453 aa20.19■□□□□ 0.82
CTDSP1-203ENST00000431127 ASB14A6NK59 587 aa20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 NFIBO00712 420 aa20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 CNTN2Q02246 1040 aa20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 ANKLE1Q8NAG6 615 aa20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 DDX20Q9UHI6 824 aaKnown RBP20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 OGDHLQ9ULD0 1010 aa20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 MRPL11Q9Y3B7 192 aaKnown RBP20.18■□□□□ 0.82
CTDSP1-203ENST00000431127 PTPDC1A2A3K4 754 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 SEPT4O43236 478 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 TAL1P17542 331 aaPredicted RBP20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 BAATQ14032 418 aaPredicted RBP20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 LHX8Q68G74 356 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 APOA5Q6Q788 366 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 RNF207Q6ZRF8 634 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 FANCBQ8NB91 859 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 TRPV1Q8NER1 839 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 TCEANC2Q96MN5 208 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 SPZ1Q9BXG8 430 aa20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 ADD3Q9UEY8 706 aaKnown RBP20.17■□□□□ 0.82
CTDSP1-203ENST00000431127 LOC102724159A0A0B4J2E5 919 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 PNMA6FA0A0J9YX94 578 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 CASTP20810 708 aaKnown RBP20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 RPS6KB1P23443 525 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 PWP2Q15269 919 aaKnown RBP20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 PRAMEF19Q5SWL8 479 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 HOMER1Q86YM7 354 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 FBXL16Q8N461 479 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 FGD4Q96M96 766 aa20.16■□□□□ 0.82
CTDSP1-203ENST00000431127 SOWAHBA6NEL2 793 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 ZBTB43O43298 467 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 CYTH3O43739 400 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 FARP2O94887 1054 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 SNAI1O95863 264 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 RCAN1P53805 252 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 ARMCX2Q7L311 632 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 MICU3Q86XE3 530 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 RRP36Q96EU6 259 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 PIGSQ96S52 555 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 TM6SF1Q9BZW5 370 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 ABHD16BQ9H3Z7 469 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 RBM28Q9NW13 759 aaKnown RBP20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 PCDHA1Q9Y5I3 950 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 PLXNA1Q9UIW2 1896 aa20.15■□□□□ 0.82
CTDSP1-203ENST00000431127 CPA1P15085 419 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 RXRAP19793 462 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 CALML3P27482 149 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 RPS6P62753 249 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 PPP2R5BQ15173 497 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 SLC35G1Q2M3R5 365 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 CCDC144CPQ8IYA2 1237 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 MPHOSPH6Q99547 160 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 ZSWIM6Q9HCJ5 1215 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 BRPF3Q9ULD4 1205 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 CYP46A1Q9Y6A2 500 aa20.14■□□□□ 0.81
CTDSP1-203ENST00000431127 KLF18A0A0U1RQI7 1052 aa20.13■□□□□ 0.81
CTDSP1-203ENST00000431127 B4DLN1 442 aa20.13■□□□□ 0.81
CTDSP1-203ENST00000431127 ZNF865P0CJ78 1059 aaPredicted RBP20.13■□□□□ 0.81
CTDSP1-203ENST00000431127 AKR1A1P14550 325 aa20.13■□□□□ 0.81
CTDSP1-203ENST00000431127 MRPL12P52815 198 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms