RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 URODP06132 367 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 SRGAP2CP0DJJ0 459 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 MYBL2P10244 700 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 CRKP46108 304 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 ALDH1A3P47895 512 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 DNA2P51530 1060 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 TAOK1Q7L7X3 1001 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 EEPD1Q7L9B9 569 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 NSUN6Q8TEA1 469 aaKnown RBP4.98□□□□□ -1.61
LRRK2-204ENST00000430804 DTNBP1Q96EV8 351 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 XAGE2Q96GT9 111 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 NCDNQ9UBB6 729 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 SUGT1Q9Y2Z0 365 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 RWDD3Q9Y3V2 267 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 A0A1B0GUL7 405 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 CAPN2P17655 700 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 ATN1P54259 1190 aaPredicted RBP4.98□□□□□ -1.61
LRRK2-204ENST00000430804 SARNPP82979 210 aaKnown RBP4.98□□□□□ -1.61
LRRK2-204ENST00000430804 ERO1BQ86YB8 467 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 SIX6OS1Q8N1H7 587 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 GPATCH11Q8N954 259 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 RHPN1Q8TCX5 695 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 IFT81Q8WYA0 676 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 ARHGAP9Q9BRR9 750 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 TRPV6Q9H1D0 765 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 SRP68Q9UHB9 627 aaKnown RBP4.98□□□□□ -1.61
LRRK2-204ENST00000430804 HERC5Q9UII4 1024 aaKnown RBP4.98□□□□□ -1.61
LRRK2-204ENST00000430804 ATP7AQ04656 1500 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 TNS3Q68CZ2 1445 aa4.98□□□□□ -1.61
LRRK2-204ENST00000430804 N4BP1O75113 896 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 FARP2O94887 1054 aaPredicted RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 GH1P01241 217 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 HSPD1P10809 573 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 PPIGQ13427 754 aaKnown RBP eCLIP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 GTF2H3Q13889 308 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 EDC3Q96F86 508 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 NUP88Q99567 741 aaPredicted RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 TTLL3Q9Y4R7 772 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 STAT3P40763 770 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 NDUFV1P49821 464 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 IFFO1Q0D2I5 559 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 POLA2Q14181 598 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 VWA3BQ502W6 1294 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 PDXDC2PQ6P474 469 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 TBC1D9Q6ZT07 1266 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 REXO1Q8N1G1 1221 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SHCBP1Q8NEM2 672 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CHMP6Q96FZ7 201 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SELENOOQ9BVL4 669 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 KLHL3Q9UH77 587 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CRB1P82279 1406 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 OPLAHO14841 1288 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SYNCRIPO60506 623 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 EXOC3O60645 756 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 NPM3O75607 178 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 KRT9P35527 623 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 TAF11Q15544 211 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 KIZQ2M2Z5 673 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 TPH2Q8IWU9 490 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ARHGEF1Q92888 912 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 FAM81BQ96LP2 452 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CEP63Q96MT8 703 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 MAN1C1Q9NR34 630 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ABI2Q9NYB9 513 aaPredicted RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 KDM5DQ9BY66 1539 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 MYPNQ86TC9 1320 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 hCG_1984214I3L0E3 225 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 KIF5CO60282 957 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 DDX5P17844 614 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CHRNA5P30532 468 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 KRT83P78385 493 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CREMQ03060 361 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SPP2Q13103 211 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ARL13BQ3SXY8 428 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 IL31Q6EBC2 164 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SNRNP48Q6IEG0 339 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 LRRC31Q6UY01 552 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 PIK3R5Q8WYR1 880 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 APPBP2Q92624 585 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 RUBCNLQ9H714 662 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ARMT1Q9H993 441 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 TTC41PQ6P2S7 1318 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ITSN2Q9NZM3 1697 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 BNIP3LO60238 219 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 MCM3P25205 808 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CCT2P78371 535 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 TFCP2Q12800 502 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SYDE2Q5VT97 1194 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 PPP1R2P3Q6NXS1 205 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 SPATA24Q86W54 205 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 GPC2Q8N158 579 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CCDC63Q8NA47 563 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 EHBP1Q8NDI1 1231 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 BEST2Q8NFU1 509 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 PSPC1Q8WXF1 523 aaKnown RBP4.97□□□□□ -1.61
LRRK2-204ENST00000430804 CTAGE1Q96RT6 745 aa4.97□□□□□ -1.61
LRRK2-204ENST00000430804 ST7Q9NRC1 585 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms