RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
CHD4-202ENST00000430771 PCDHA1Q9Y5I3 950 aa12.69□□□□□ -0.38
CHD4-202ENST00000430771 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 GJB2P29033 226 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 MAPK4P31152 587 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 TRIM29Q14134 588 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 KIF22Q14807 665 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 NOM1Q5C9Z4 860 aaKnown RBP12.68□□□□□ -0.38
CHD4-202ENST00000430771 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 MAF1Q9H063 256 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 HOMER2Q9NSB8 354 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
CHD4-202ENST00000430771 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
CHD4-202ENST00000430771 ESYT2A0FGR8 921 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 STXBP3O00186 592 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
CHD4-202ENST00000430771 TBC1D8O95759 1140 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 ERCC3P19447 782 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 SLC4A3P48751 1232 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 PKN1Q16512 942 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 WDR78Q5VTH9 848 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 POTEEQ6S8J3 1075 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD4-202ENST00000430771 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 TRERF1Q96PN7 1200 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 BRMS1Q9HCU9 246 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 WBP1LQ9NX94 342 aa12.67□□□□□ -0.38
CHD4-202ENST00000430771 PFASO15067 1338 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 FDPSP14324 419 aaKnown RBP12.66□□□□□ -0.38
CHD4-202ENST00000430771 PDCP20941 246 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 CALML3P27482 149 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 GNA11P29992 359 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 ADCY7P51828 1080 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 FCGRTP55899 365 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 SP3Q02447 781 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 CUL5Q93034 780 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 COA7Q96BR5 231 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 ERO1AQ96HE7 468 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 C8orf76Q96K31 380 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 VPS54Q9P1Q0 977 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 CASP8AP2Q9UKL3 1982 aa12.66□□□□□ -0.38
CHD4-202ENST00000430771 ZSWIM8A7E2V4 1837 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 GPR25O00155 361 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 PEX10O60683 326 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 FKTNO75072 461 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
CHD4-202ENST00000430771 NLRP5P59047 1200 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 LACTBP83111 547 aaPredicted RBP12.65□□□□□ -0.38
CHD4-202ENST00000430771 KCTD2Q14681 263 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 Q3C1V9 767 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 GPR142Q7Z601 462 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 RGS22Q8NE09 1264 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 SOCS4Q8WXH5 440 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 MMP19Q99542 508 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 PORCNQ9H237 461 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 EFCC1Q9HA90 598 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 MAP3K20Q9NYL2 800 aaKnown RBP12.65□□□□□ -0.38
CHD4-202ENST00000430771 RIPK3Q9Y572 518 aa12.65□□□□□ -0.38
CHD4-202ENST00000430771 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 PLXNA1Q9UIW2 1896 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 H3BQV1 296 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
CHD4-202ENST00000430771 NFIBO00712 420 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 TNPO2O14787 897 aaKnown RBP12.64□□□□□ -0.39
CHD4-202ENST00000430771 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 FCER1AP12319 257 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
CHD4-202ENST00000430771 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
CHD4-202ENST00000430771 FOSBP53539 338 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 GHRHRQ02643 423 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 SAFBQ15424 915 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHD4-202ENST00000430771 MUM1L1Q5H9M0 696 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 PLEKHH3Q7Z736 793 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 ANKRD35Q8N283 1001 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 DAGLBQ8NCG7 672 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 ZMYND12Q9H0C1 365 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
CHD4-202ENST00000430771 A1CFQ9NQ94 594 aaKnown RBP12.64□□□□□ -0.39
CHD4-202ENST00000430771 LCTP09848 1927 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms