RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 SLC15A5A6NIM6 579 aa20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 PPP1R11O60927 126 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 SLC4A3P48751 1232 aa20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 USH1GQ495M9 461 aa20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 WDR78Q5VTH9 848 aa20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 RGS22Q8NE09 1264 aa20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 SOCS4Q8WXH5 440 aa20.94■□□□□ 0.94
CDC42EP1-203ENST00000430687 COL11A1P12107 1806 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 CD2BP2O95400 341 aaKnown RBP20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 SSRP1Q08945 709 aaKnown RBP20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 GRB14Q14449 540 aa20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 KCTD2Q14681 263 aa20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 MORN1Q5T089 497 aa20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 SAMD3Q8N6K7 520 aa20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 NECAB1Q8N987 351 aa20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 PIBF1Q8WXW3 757 aa20.93■□□□□ 0.94
CDC42EP1-203ENST00000430687 PFKFB3Q16875 520 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 MCF2L2Q86YR7 1114 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 CLEC4DQ8WXI8 215 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 PHKBQ93100 1093 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 SNX21Q969T3 373 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 TMX3Q96JJ7 454 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 MMP19Q99542 508 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 NUDT12Q9BQG2 462 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 LLPHQ9BRT6 129 aaKnown RBP20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 SLC26A6Q9BXS9 759 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 HOMER2Q9NSB8 354 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 SRRDQ9UH36 339 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 GJD2Q9UKL4 321 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 PCNTO95613 3336 aa20.92■□□□□ 0.94
CDC42EP1-203ENST00000430687 PFASO15067 1338 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 DEXIO95424 95 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 SCG2P13521 617 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 CAP1Q01518 475 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 MUM1L1Q5H9M0 696 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 OTOP1Q7RTM1 612 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 CTU1Q7Z7A3 348 aaKnown RBP20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 TEX2Q8IWB9 1127 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 ANKRD35Q8N283 1001 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 USP6NLQ92738 828 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 STK36Q9NRP7 1315 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 SLC5A4Q9NY91 659 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
CDC42EP1-203ENST00000430687 hCG_1642624A0A1W2PR95 340 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 CTDNEP1O95476 244 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 MAP2K5Q13163 448 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 IRF5Q13568 498 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 PKN1Q16512 942 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 PKN2Q16513 984 aaKnown RBP20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 PPP1R18Q6NYC8 613 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 FAM177A1Q8N128 213 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 DDX11Q96FC9 970 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 BARHL2Q9NY43 387 aa20.9■□□□□ 0.94
CDC42EP1-203ENST00000430687 NFIBO00712 420 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 ECM2O94769 699 aaPredicted RBP20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 HOXC6P09630 235 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 XRCC5P13010 732 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 ADORA2AP29274 412 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 RGS2P41220 211 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 GHRHRQ02643 423 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 ST3GAL1Q11201 340 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 HEATR3Q7Z4Q2 680 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 CCDC83Q8IWF9 413 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 NSUN7Q8NE18 718 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 WASF1Q92558 559 aa20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 A1CFQ9NQ94 594 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 DIS3Q9Y2L1 958 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-203ENST00000430687 DNAJC25-GNG10A0A024R161 153 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 FLT3LGP49771 235 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 PRKCZQ05513 592 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 WWC2Q6AWC2 1192 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 DPP9Q86TI2 863 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 CCDC12Q8WUD4 166 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 SH3GLB2Q9NR46 395 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 CYP39A1Q9NYL5 469 aa20.88■□□□□ 0.93
CDC42EP1-203ENST00000430687 PTPDC1A2A3K4 754 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 OPLAHO14841 1288 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 TAL1P17542 331 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 HMGN5P82970 282 aaKnown RBP20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 NSMFQ6X4W1 530 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 RNF207Q6ZRF8 634 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 TRMT44Q8IYL2 757 aaKnown RBP20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 GLT8D2Q9H1C3 349 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 GABRQQ9UN88 632 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 PTPN22Q9Y2R2 807 aa20.87■□□□□ 0.93
CDC42EP1-203ENST00000430687 ZNF236Q9UL36 1845 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 STXBP3O00186 592 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 COBLO75128 1261 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 HSD17B4P51659 736 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 NAPAP54920 295 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 RPS6P62753 249 aaKnown RBP20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 BAATQ14032 418 aaPredicted RBP20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 ZNF792Q3KQV3 632 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 GPKOWQ92917 476 aaPredicted RBP eCLIP20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 APBA2Q99767 749 aa20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 ORC3Q9UBD5 711 aaPredicted RBP20.86■□□□□ 0.93
CDC42EP1-203ENST00000430687 ESYT2A0FGR8 921 aa20.85■□□□□ 0.93
CDC42EP1-203ENST00000430687 POTEB2H3BUK9 544 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms