RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 MYH7BA7E2Y1 1941 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 KLRG2A4D1S0 409 aaPredicted RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 POTEMA6NI47 508 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 LRRC10BA6NIK2 292 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 TADA3O75528 432 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 ATP2B2Q01814 1243 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 RIOX1Q9H6W3 641 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 ZSWIM4Q9H7M6 989 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 SCN9AQ15858 1988 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 SMCHD1A6NHR9 2005 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 TAL1P17542 331 aaPredicted RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 SHMT1P34896 483 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 CCDC178Q5BJE1 867 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 KCTD1Q719H9 257 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 COL23A1Q86Y22 540 aaPredicted RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 DUSP9Q99956 384 aaKnown RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 SRRTQ9BXP5 876 aaKnown RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 DNAJC18Q9H819 358 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 MYH4Q9Y623 1939 aa14.04□□□□□ -0.16
TNFSF13B-202ENST00000430559 COL11A2P13942 1736 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 ERCC3P19447 782 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 CLCN6P51797 869 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 UBXN1Q04323 297 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 CT47A1Q5JQC4 288 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 CDC42EP5Q6NZY7 148 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 REXO1Q8N1G1 1221 aaKnown RBP14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 TRIM9Q9C026 710 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 ABHD10Q9NUJ1 306 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 USP40Q9NVE5 1235 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 TRIM10Q9UDY6 481 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 IGKV6D-41A0A0C4DH26 115 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 SRGNP10124 158 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 H2AFXP16104 143 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 TTI2Q6NXR4 508 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 KCNK18Q7Z418 384 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 GLIS3Q8NEA6 775 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 JMJD4Q9H9V9 463 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 C6orf50Q9HD87 102 aa14.03□□□□□ -0.16
TNFSF13B-202ENST00000430559 TTC26A0AVF1 554 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 PES1O00541 588 aaKnown RBP14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 CCP110O43303 1012 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 RHOBTB3O94955 611 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 PLCG2P16885 1265 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 CASQ1P31415 396 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 TCP10Q12799 353 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 FILIP1LQ4L180 1135 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 KRT25Q7Z3Z0 450 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 KIAA0895Q8NCT3 520 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 ZBTB9Q96C00 473 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 CTAGE1Q96RT6 745 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 NUP88Q99567 741 aaPredicted RBP14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 ZNF287Q9HBT7 754 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 BLOC1S4Q9NUP1 217 aa14.02□□□□□ -0.16
TNFSF13B-202ENST00000430559 NRXN2Q9P2S2 1712 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 SEC31AO94979 1220 aaKnown RBP14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 CCDC175P0C221 793 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 MAP3K9P80192 1104 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 GRB10Q13322 594 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 ECM1Q16610 540 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 GALNT17Q6IS24 598 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 ADGRF4Q8IZF3 695 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 CCDC12Q8WUD4 166 aaPredicted RBP14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 TRIM47Q96LD4 638 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 PNMA5Q96PV4 448 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 LZTS2Q9BRK4 669 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 MRFAP1Q9Y605 127 aa14.02□□□□□ -0.17
TNFSF13B-202ENST00000430559 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 B4DLN1 442 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 MPHOSPH10O00566 681 aaKnown RBP14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 KRT9P35527 623 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 PRPHP41219 470 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 ASIC1P78348 528 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 PDE4DQ08499 809 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 MCM6Q14566 821 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 SOGA3Q5TF21 947 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 ANKRD40Q6AI12 368 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 KRT27Q7Z3Y8 459 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 SLF1Q9BQI6 1058 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 ZC3H12CQ9C0D7 883 aaKnown RBP14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 REXO2Q9Y3B8 237 aaKnown RBP14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 SIPA1L1O43166 1804 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 RAD21O60216 631 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 TNNI2P48788 182 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 SNAP25P60880 206 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 DYMQ7RTS9 669 aa14.01□□□□□ -0.17
TNFSF13B-202ENST00000430559 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms