RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 NLGN2Q8NFZ4 835 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 PGBD1Q96JS3 809 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 IMPG2Q9BZV3 1241 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 FOXP1Q9H334 677 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 GBA2Q9HCG7 927 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 RCAN1P53805 252 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 ARHGAP29Q52LW3 1261 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 GTF3C2Q8WUA4 911 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 RTFDC1Q9BY42 306 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 LY9Q9HBG7 655 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 TRMT1Q9NXH9 659 aaKnown RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 CCL15-CCL14A0A0B4J2E2 113 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 UBE2Q2LH0YL09 131 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 ECE1P42892 770 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 CCL15Q16663 113 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 MTMR4Q9NYA4 1195 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 HOXA13P31271 388 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-207ENST00000429896 UBE2SQ16763 222 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 MIS18BP1Q6P0N0 1132 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 EEPD1Q7L9B9 569 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 PROM2Q8N271 834 aa14.43□□□□□ -0.1
PTCH1-207ENST00000429896 GCFC2P16383 781 aaKnown RBP14.42□□□□□ -0.1
PTCH1-207ENST00000429896 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 LRCH2Q5VUJ6 765 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 CNNM4Q6P4Q7 775 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 RASGRP4Q8TDF6 673 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 USP25Q9UHP3 1055 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 COMMD10Q9Y6G5 202 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 HARSP12081 509 aaKnown RBP14.42□□□□□ -0.1
PTCH1-207ENST00000429896 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
PTCH1-207ENST00000429896 GTF2A2P52657 109 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 TRIM6Q9C030 488 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-207ENST00000429896 NBPF3Q9H094 633 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 YEATS4O95619 227 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 FCER1AP12319 257 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 EIF2AK2P19525 551 aaKnown RBP14.42□□□□□ -0.1
PTCH1-207ENST00000429896 TRAPPC10P48553 1259 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 COG2Q14746 738 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 FBXO18Q8NFZ0 1043 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 STAT3P40763 770 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 ZNF165P49910 485 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 MYCT1Q8N699 235 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 ALS2Q96Q42 1657 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 NHSL1Q5SYE7 1610 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 PPP1R2P41236 205 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 XKR9Q5GH70 373 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 TBCKQ8TEA7 893 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 ACAD9Q9H845 621 aa14.42□□□□□ -0.1
PTCH1-207ENST00000429896 EPB41L4AQ9HCS5 686 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-207ENST00000429896 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
PTCH1-207ENST00000429896 SPAG1Q07617 926 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 AP3B2Q13367 1082 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 LEO1Q8WVC0 666 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-207ENST00000429896 KCNQ5Q9NR82 932 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 POLR2DO15514 142 aaKnown RBP14.41□□□□□ -0.1
PTCH1-207ENST00000429896 MAP2K1Q02750 393 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-207ENST00000429896 LAD1O00515 517 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-207ENST00000429896 CASQ1P31415 396 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 MAP1SQ66K74 1059 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-207ENST00000429896 ADGRF4Q8IZF3 695 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 GSTTP1A0A1W2PQM5 241 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 MMP1P03956 469 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 FAM102BQ5T8I3 360 aa14.41□□□□□ -0.1
PTCH1-207ENST00000429896 ATP6V0A1Q93050 837 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 CTAGE1Q96RT6 745 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 FRMD4BQ9Y2L6 1034 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 TNPO2O14787 897 aaKnown RBP14.4□□□□□ -0.1
PTCH1-207ENST00000429896 CHGBP05060 677 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 SPA17Q15506 151 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 MFSD14CQ5VZR4 134 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 RASA1P20936 1047 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 TDRD12Q587J7 1177 aaKnown RBP14.4□□□□□ -0.1
PTCH1-207ENST00000429896 ZKSCAN4Q969J2 545 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-207ENST00000429896 SRRTQ9BXP5 876 aaKnown RBP14.4□□□□□ -0.1
PTCH1-207ENST00000429896 N4BP3O15049 544 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 PRPF4BQ13523 1007 aaKnown RBP14.4□□□□□ -0.1
PTCH1-207ENST00000429896 STXBP2Q15833 593 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 WDR11Q9BZH6 1224 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 CALUO43852 315 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-207ENST00000429896 YY1P25490 414 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 TMOD1P28289 359 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 IGBP1P78318 339 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 DEPTORQ8TB45 409 aa14.4□□□□□ -0.1
PTCH1-207ENST00000429896 TRPM3Q9HCF6 1732 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-207ENST00000429896 NFIAQ12857 509 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 DYMQ7RTS9 669 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 CCDC66A2RUB6 948 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 ERLIN1O75477 346 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 CPVLQ9H3G5 476 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 VCPKMTQ9H867 229 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 WNT10BO00744 389 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 PFKFB3Q16875 520 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-207ENST00000429896 LRP10Q7Z4F1 713 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 FAM83AQ86UY5 434 aa14.39□□□□□ -0.11
PTCH1-207ENST00000429896 NSUN6Q8TEA1 469 aaKnown RBP14.39□□□□□ -0.11
PTCH1-207ENST00000429896 ZNF215Q9UL58 517 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms