RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PAGE5Q96GU1 130 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 CARD6Q9BX69 1037 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 INCENPQ9NQS7 918 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 SH3GLB2Q9NR46 395 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.83□□□□□ -0.84
GABPB1-205ENST00000429662 TTF2Q9UNY4 1162 aaKnown RBP9.83□□□□□ -0.84
GABPB1-205ENST00000429662 TACC3Q9Y6A5 838 aa9.83□□□□□ -0.84
GABPB1-205ENST00000429662 V9GYY5 206 aaPredicted RBP9.83□□□□□ -0.84
GABPB1-205ENST00000429662 SYNRGQ9UMZ2 1314 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 NUP98P52948 1817 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 LRRC10BA6NIK2 292 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 MINDY4BA8MYZ0 360 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 NTSR2O95665 410 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 PNMA6AP0CW24 399 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 KIF5BP33176 963 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 TXLNAP40222 546 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 PBX1P40424 430 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 ATP2C1P98194 919 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 FUT2Q10981 343 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 SF3B3Q15393 1217 aaKnown RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 PKN1Q16512 942 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 TTC38Q5R3I4 469 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 DLK2Q6UY11 383 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 TMTC3Q6ZXV5 915 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 USP50Q70EL3 339 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 RSRC2Q7L4I2 434 aaKnown RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 ANKRD18AQ8IVF6 992 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 MSL3Q8N5Y2 521 aaKnown RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 IGSF22Q8N9C0 903 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 CTCFLQ8NI51 663 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 DHX58Q96C10 678 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 RIOK1Q9BRS2 568 aaKnown RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 GLIS2Q9BZE0 524 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 BSDC1Q9NW68 430 aaPredicted RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 ZNF446Q9NWS9 450 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 SAGE1Q9NXZ1 904 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 ADD3Q9UEY8 706 aaKnown RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 LIMA1Q9UHB6 759 aaKnown RBP9.82□□□□□ -0.84
GABPB1-205ENST00000429662 RWDD2AQ9UIY3 292 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 FHOD1Q9Y613 1164 aa9.82□□□□□ -0.84
GABPB1-205ENST00000429662 CELF2O95319 508 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 LONP1P36776 959 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 GNAQP50148 359 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 HIRAP54198 1017 aaPredicted RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 GRIN1Q05586 938 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 GPS2Q13227 327 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 SBK1Q52WX2 424 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 SPECC1Q5M775 1068 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 GALNT17Q6IS24 598 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 RASGRP2Q7LDG7 609 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 ENAHQ8N8S7 591 aaPredicted RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 CNBD1Q8NA66 436 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 NOC3LQ8WTT2 800 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 HNRNPLLQ8WVV9 542 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 TNFRSF25Q93038 417 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 KIFC2Q96AC6 838 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 PSMD1Q99460 953 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 ZKSCAN3Q9BRR0 538 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 GBP3Q9H0R5 595 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 SEC31BQ9NQW1 1179 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 SAMSN1Q9NSI8 373 aaKnown RBP9.81□□□□□ -0.84
GABPB1-205ENST00000429662 ATP8A2Q9NTI2 1148 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 ADGRG1Q9Y653 693 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 ECM29Q5VYK3 1845 aa9.81□□□□□ -0.84
GABPB1-205ENST00000429662 CCDC151A5D8V7 595 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 PPP1R3GB7ZBB8 358 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 H7C1D1 291 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 MFAP3LO75121 409 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 ERLIN1O75477 346 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 HOXA7P31268 230 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 PPP1R2P41236 205 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 ADKP55263 362 aaKnown RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 TROAPQ12815 778 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 NOGQ13253 232 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 TOGARAM2Q6ZUX3 1019 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 APTXQ7Z2E3 356 aaKnown RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 SRGAP1Q7Z6B7 1085 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 MIGA1Q8NAN2 632 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 RNF186Q9NXI6 227 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 VPS54Q9P1Q0 977 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 CALCOCO1Q9P1Z2 691 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 ARPP21Q9UBL0 812 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 CDC23Q9UJX2 597 aa9.8□□□□□ -0.84
GABPB1-205ENST00000429662 ZHX1Q9UKY1 873 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 NIP7Q9Y221 180 aaKnown RBP eCLIP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 V9GY48 417 aaPredicted RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 KIAA0100Q14667 2235 aaKnown RBP9.8□□□□□ -0.84
GABPB1-205ENST00000429662 CTAGE9A4FU28 777 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 UBE2Q2LH0YL09 131 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 LAD1O00515 517 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 NPHP1O15259 732 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 SCG2P13521 617 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 ATP2B1P20020 1258 aa9.79□□□□□ -0.84
GABPB1-205ENST00000429662 PLA2G4AP47712 749 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms