RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 NAT10Q9H0A0 1025 aaKnown RBP10.94□□□□□ -0.66
NEDD1-203ENST00000429527 VCPKMTQ9H867 229 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 PPP6R2O75170 966 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 SLFN14P0C7P3 912 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 AXDND1Q5T1B0 1012 aaPredicted RBP10.94□□□□□ -0.66
NEDD1-203ENST00000429527 MAP3K21Q5TCX8 1036 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 NEDD1Q8NHV4 660 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 MRPS27Q92552 414 aaKnown RBP10.94□□□□□ -0.66
NEDD1-203ENST00000429527 TRIM17Q9Y577 477 aa10.94□□□□□ -0.66
NEDD1-203ENST00000429527 E7EWF7 191 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CYP2D6P10635 497 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 HMGCS2P54868 508 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 HERVK_113P62684 666 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
NEDD1-203ENST00000429527 NT5DC1Q5TFE4 455 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CCAR1Q8IX12 1150 aaKnown RBP10.93□□□□□ -0.66
NEDD1-203ENST00000429527 REPS2Q8NFH8 660 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.93□□□□□ -0.66
NEDD1-203ENST00000429527 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 USP17L21D6R901 530 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CCP110O43303 1012 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 FDX1P10109 184 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 VCAM1P19320 739 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CMA1P23946 247 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 NLRP12P59046 1061 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CEP57L1Q8IYX8 460 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CCDC112Q8NEF3 446 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 TRIM5Q9C035 493 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 LCTP09848 1927 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 TRIM75PA6NK02 468 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 HSPD1P10809 573 aaKnown RBP10.93□□□□□ -0.66
NEDD1-203ENST00000429527 AKR1B1P15121 316 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
NEDD1-203ENST00000429527 NACAP1Q9BZK3 213 aa10.93□□□□□ -0.66
NEDD1-203ENST00000429527 GDF11O95390 407 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 RCAN1P53805 252 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 E4F1Q66K89 784 aaPredicted RBP10.92□□□□□ -0.66
NEDD1-203ENST00000429527 CPA4Q9UI42 421 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 PTCH2Q9Y6C5 1203 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 ZRANB2O95218 330 aaKnown RBP eCLIP10.92□□□□□ -0.66
NEDD1-203ENST00000429527 FECHP22830 423 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 DSG3P32926 999 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 TBX2Q13207 712 aaPredicted RBP10.92□□□□□ -0.66
NEDD1-203ENST00000429527 SRRTQ9BXP5 876 aaKnown RBP10.92□□□□□ -0.66
NEDD1-203ENST00000429527 TANGO6Q9C0B7 1094 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.92□□□□□ -0.66
NEDD1-203ENST00000429527 PCDHA7Q9UN72 937 aa10.92□□□□□ -0.66
NEDD1-203ENST00000429527 ALPK3Q96L96 1907 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 SLC15A5A6NIM6 579 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 CYP2C8P10632 490 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 PSMC4P43686 418 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 OAZ1P54368 228 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 SEPT2Q15019 361 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 SHROOM1Q2M3G4 852 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-203ENST00000429527 FAM173BQ6P4H8 233 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 CKAP2LQ8IYA6 745 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 GPRC5AQ8NFJ5 357 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 P2RX7Q99572 595 aaKnown RBP10.91□□□□□ -0.66
NEDD1-203ENST00000429527 ARHGAP39Q9C0H5 1083 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 PAK6Q9NQU5 681 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-203ENST00000429527 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
NEDD1-203ENST00000429527 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 ERVK-24P63145 666 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 FBXO18Q8NFZ0 1043 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 ZNFX1Q9P2E3 1918 aaKnown RBP10.91□□□□□ -0.66
NEDD1-203ENST00000429527 CCDC69A6NI79 296 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 CHGBP05060 677 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 EVX2Q03828 476 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 GRB14Q14449 540 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 CAMK4Q16566 473 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 OLFML2BQ68BL8 750 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
NEDD1-203ENST00000429527 GOLGA6L4A6NEF3 574 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 SLC3A2P08195 630 aaKnown RBP10.9□□□□□ -0.66
NEDD1-203ENST00000429527 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.66
NEDD1-203ENST00000429527 PPARAQ07869 468 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 FOXD4L6Q3SYB3 417 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-203ENST00000429527 KMT5BQ4FZB7 885 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 FOXD4L3Q6VB84 417 aaPredicted RBP10.9□□□□□ -0.66
NEDD1-203ENST00000429527 CCDC73Q6ZRK6 1079 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 FERMT3Q86UX7 667 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 SPC24Q8NBT2 197 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 ACER1Q8TDN7 264 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 DIS3Q9Y2L1 958 aaKnown RBP10.9□□□□□ -0.66
NEDD1-203ENST00000429527 MYH6P13533 1939 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms