RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PI4K2BQ8TCG2 481 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 KCNG4Q8TDN1 519 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 NCSTNQ92542 709 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 RBM33Q96EV2 1170 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 NACA2Q9H009 215 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 MED1Q15648 1581 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZNF233A6NK53 670 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 F6X3S4 739 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 MAP3K13O43283 966 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 USO1O60763 962 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 WFS1O76024 890 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 ATP6V1C1P21283 382 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 PTH1RQ03431 593 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 PAK2Q13177 524 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 TOB2Q14106 344 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 USH1GQ495M9 461 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 OR52E8Q6IFG1 317 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZNF572Q7Z3I7 529 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 PPFIBP1Q86W92 1011 aa9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-206ENST00000429440 ADAMTSL3P82987 1691 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 KRT14P02533 472 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 BCRP11274 1271 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 NQO1P15559 274 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ADCY1Q08828 1119 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 CLPPQ16740 277 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 QPCTQ16769 361 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 CREB3L3Q68CJ9 461 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZNF280DQ6N043 979 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 CNGA4Q8IV77 575 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 LRRC43Q8N309 656 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ABTB2Q8N961 1025 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 FTOQ9C0B1 505 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 TAF1DQ9H5J8 278 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZNHIT6Q9NWK9 470 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 SLC12A6Q9UHW9 1150 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 WDR17Q8IZU2 1322 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 A0A1B0GTH6 734 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 JAK2O60674 1132 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 KRT38O76015 456 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 YEATS4O95619 227 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 TUBP50607 506 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 CCT4P50991 539 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 BPIFB4P59827 614 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ATP8B2P98198 1209 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ITIH4Q14624 930 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 TAF7Q15545 349 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 KLHL10Q6JEL2 608 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 C16orf87Q6PH81 154 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 SEPT14Q6ZU15 432 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 NCCRP1Q6ZVX7 275 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 ANKS4BQ8N8V4 417 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 LINS1Q8NG48 757 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 AZIN2Q96A70 460 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 SEC62Q99442 399 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 OCEL1Q9H607 264 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 GPCPD1Q9NPB8 672 aa9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 TUBA8Q9NY65 449 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-206ENST00000429440 GNAT3A8MTJ3 354 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 PFDN1O60925 122 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 MFAP3LO75121 409 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 CMA1P23946 247 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 TRPC1P48995 793 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 PTPN21Q16825 1174 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 TMEM154Q6P9G4 183 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZNF662Q6ZS27 426 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 TBC1D1Q86TI0 1168 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 TMEM110Q86TL2 294 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 CCDC197Q8NCU1 140 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 WDR66Q8TBY9 1149 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 RSPH1Q8WYR4 309 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 ZNF653Q96CK0 615 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 HAUS4Q9H6D7 363 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 TBC1D7Q9P0N9 293 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 WWC3Q9ULE0 1092 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 TMED5Q9Y3A6 229 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 ANO9A1A5B4 782 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 ATP2C2O75185 946 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 ACADSP16219 412 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 OXCT1P55809 520 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 SULT2A1Q06520 285 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 OLFML1Q6UWY5 402 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 NUTM2AQ8IVF1 878 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 LSM14AQ8ND56 463 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 ENOX1Q8TC92 643 aaKnown RBP9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 MAP4K1Q92918 833 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 SH3GLB1Q9Y371 365 aa9.78□□□□□ -0.84
CDC42BPA-206ENST00000429440 KDM3BQ7LBC6 1761 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 GFPT2O94808 682 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 UPP2O95045 317 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 MYBL1P10243 752 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 PCK1P35558 622 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 IRGCQ6NXR0 463 aa9.77□□□□□ -0.85
CDC42BPA-206ENST00000429440 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms