RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 KCNK3O14649 394 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 RPN1P04843 607 aaKnown RBP14.01□□□□□ -0.17
LDB3-205ENST00000429277 LMNB1P20700 586 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 USP14P54578 494 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 RNF26Q9BY78 433 aaPredicted RBP14.01□□□□□ -0.17
LDB3-205ENST00000429277 FAN1Q9Y2M0 1017 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 PASKQ96RG2 1323 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 BTDP43251 543 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 SEPT14Q6ZU15 432 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 ANKRD35Q8N283 1001 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 FOXP1Q9H334 677 aaPredicted RBP14.01□□□□□ -0.17
LDB3-205ENST00000429277 TTLL3Q9Y4R7 772 aa14.01□□□□□ -0.17
LDB3-205ENST00000429277 ADCY9O60503 1353 aa14□□□□□ -0.17
LDB3-205ENST00000429277 XDHP47989 1333 aa14□□□□□ -0.17
LDB3-205ENST00000429277 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
LDB3-205ENST00000429277 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
LDB3-205ENST00000429277 KRT3P12035 628 aa14□□□□□ -0.17
LDB3-205ENST00000429277 NSFP46459 744 aaKnown RBP14□□□□□ -0.17
LDB3-205ENST00000429277 MFAP3P55082 362 aa14□□□□□ -0.17
LDB3-205ENST00000429277 PTK2Q05397 1052 aa14□□□□□ -0.17
LDB3-205ENST00000429277 ADAM9Q13443 819 aa14□□□□□ -0.17
LDB3-205ENST00000429277 MYOM2P54296 1465 aa14□□□□□ -0.17
LDB3-205ENST00000429277 WDR46O15213 610 aaKnown RBP14□□□□□ -0.17
LDB3-205ENST00000429277 PPP6R2O75170 966 aa14□□□□□ -0.17
LDB3-205ENST00000429277 IFNB1P01574 187 aa14□□□□□ -0.17
LDB3-205ENST00000429277 RDH13Q8NBN7 331 aa14□□□□□ -0.17
LDB3-205ENST00000429277 CDHR1Q96JP9 859 aa14□□□□□ -0.17
LDB3-205ENST00000429277 MED4Q9NPJ6 270 aa14□□□□□ -0.17
LDB3-205ENST00000429277 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
LDB3-205ENST00000429277 OAS2P29728 719 aaKnown RBP14□□□□□ -0.17
LDB3-205ENST00000429277 POLGP54098 1239 aaPredicted RBP14□□□□□ -0.17
LDB3-205ENST00000429277 PNMA8AQ86V59 439 aaPredicted RBP14□□□□□ -0.17
LDB3-205ENST00000429277 USP28Q96RU2 1077 aa14□□□□□ -0.17
LDB3-205ENST00000429277 PSMD6Q15008 389 aa14□□□□□ -0.17
LDB3-205ENST00000429277 FAM71BQ8TC56 605 aa14□□□□□ -0.17
LDB3-205ENST00000429277 WDR11Q9BZH6 1224 aa14□□□□□ -0.17
LDB3-205ENST00000429277 CPSF2Q9P2I0 782 aaKnown RBP14□□□□□ -0.17
LDB3-205ENST00000429277 PTPREP23469 700 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 PRPSAP1Q14558 356 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 ABCB5Q2M3G0 1257 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 EAF2Q96CJ1 260 aaPredicted RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 PDE8BO95263 885 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 EEF1GP26641 437 aaKnown RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 LRMPQ12912 555 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 SULF1Q8IWU6 871 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 STAMQ92783 540 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 DCPSQ96C86 337 aaKnown RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 DHTKD1Q96HY7 919 aaPredicted RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 AATKQ6ZMQ8 1374 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 ATF2P15336 505 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 Q9H521 79 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 STAP2Q9UGK3 403 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 MTMR6Q9Y217 621 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 TLR3O15455 904 aaKnown RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 ABCB4P21439 1286 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 IL6STP40189 918 aaPredicted RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 ETF1P62495 437 aaKnown RBP13.99□□□□□ -0.17
LDB3-205ENST00000429277 CHRNDQ07001 517 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 BFSP1Q12934 665 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 LONRF3Q496Y0 759 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 CCDC13Q8IYE1 715 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 PSMB7Q99436 277 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 PAGR1Q9BTK6 254 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 PPP1R12CQ9BZL4 782 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 PPP2R2CQ9Y2T4 447 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 ZNF804BA4D1E1 1349 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 NEO1Q92859 1461 aa13.99□□□□□ -0.17
LDB3-205ENST00000429277 EXOC3L4Q17RC7 722 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 NT5C1BQ96P26 610 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 MMS19Q96T76 1030 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 FGAP02671 866 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 SRGAP2BP0DMP2 458 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 SCYL2Q6P3W7 929 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 FBXO18Q8NFZ0 1043 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 WDR70Q9NW82 654 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 CCPG1Q9ULG6 757 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
LDB3-205ENST00000429277 PRKG1Q13976 671 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 TMED8Q6PL24 325 aaPredicted RBP13.98□□□□□ -0.17
LDB3-205ENST00000429277 SPZ1Q9BXG8 430 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
LDB3-205ENST00000429277 PCDHA1Q9Y5I3 950 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 MLH3Q9UHC1 1453 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 hCG_1642624A0A1W2PR95 340 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 SEPT2Q15019 361 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 FAM47CQ5HY64 1035 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 TRIM42Q8IWZ5 723 aa13.98□□□□□ -0.17
LDB3-205ENST00000429277 A6NJR5 290 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 GYG1P46976 350 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 KCTD2Q14681 263 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 PPM1KQ8N3J5 372 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
LDB3-205ENST00000429277 ABCC12Q96J65 1359 aa13.97□□□□□ -0.17
LDB3-205ENST00000429277 CDC25BP30305 580 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms