RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 KRT40Q6A162 431 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 MFSD6Q6ZSS7 791 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZNF473Q8WTR7 871 aaKnown RBP15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 CUL5Q93034 780 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 RPGRIP1Q96KN7 1286 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 TCHPQ9BT92 498 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 NOD2Q9HC29 1040 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 DIAPH2O60879 1101 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 CNTNAP4Q9C0A0 1308 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 PDE8BO95263 885 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 RTN1Q16799 776 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 VCX3BQ9H321 246 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 MMADHCQ9H3L0 296 aaPredicted RBP15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 VCX3AQ9NNX9 186 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 NDUFB9Q9Y6M9 179 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 GPAA1O43292 621 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 PAFAH1B1P43034 410 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 NNTQ13423 1086 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 NAA15Q9BXJ9 866 aaKnown RBP15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 IMPDH2P12268 514 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 NLRP14Q86W24 1093 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 TEKT4Q8WW24 435 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 GOLPH3LQ9H4A5 285 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 CLIC4Q9Y696 253 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 ABCC12Q96J65 1359 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 SERPINB2P05120 415 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 CYP7A1P22680 504 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 CCDC96Q2M329 555 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 TSNAXIP1Q2TAA8 658 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 IRX2Q9BZI1 471 aaPredicted RBP15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 EPN3Q9H201 632 aa15.93■□□□□ 0.14
SYNGAP1-203ENST00000428982 STXBP3O00186 592 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 OATP04181 439 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 WTAPQ15007 396 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 NAA35Q5VZE5 725 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 VSTM4Q8IW00 320 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 FUKQ8N0W3 1084 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 GBP7Q8N8V2 638 aaPredicted RBP15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 ANP32DO95626 131 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 NCAPH2Q6IBW4 605 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 NUP88Q99567 741 aaPredicted RBP15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 HINFPQ9BQA5 517 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 HIP1RO75146 1068 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 KIF23Q02241 960 aaPredicted RBP15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 SETDB1Q15047 1291 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 PPP2R5BQ15173 497 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 CWF19L1Q69YN2 538 aaKnown RBP15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 BZW1Q7L1Q6 419 aaKnown RBP15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZNF609O15014 1411 aa15.92■□□□□ 0.14
SYNGAP1-203ENST00000428982 MINDY4BA8MYZ0 360 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 CETN3O15182 167 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZNF189O75820 626 aaPredicted RBP15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 CAMTA2O94983 1202 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 ATP1A3P13637 1013 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 HIBADHP31937 336 aaKnown RBP15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 GBP5Q96PP8 586 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 SEC31BQ9NQW1 1179 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 BAG3O95817 575 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 RAB11FIP4Q86YS3 637 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZNF34Q8IZ26 560 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 SYNE4Q8N205 404 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 STAMBPL1Q96FJ0 436 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 CCT8L2Q96SF2 557 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZFATQ9P243 1243 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 PAIP2BQ9ULR5 123 aaKnown RBP15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 UFL1O94874 794 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 AARSP49588 968 aaKnown RBP eCLIP15.91■□□□□ 0.142e-7■■□□□ 13.7
SYNGAP1-203ENST00000428982 GSTO1P78417 241 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 FOXO4P98177 505 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 ENGASEQ8NFI3 743 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 SAR1BQ9Y6B6 198 aa15.91■□□□□ 0.14
SYNGAP1-203ENST00000428982 MYBL1P10243 752 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 CDC25CP30307 473 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 GBP1P32455 592 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 CHRNDQ07001 517 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 INTS5Q6P9B9 1019 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 EYA3Q99504 573 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 RMND1Q9NWS8 449 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 MYO1AQ9UBC5 1043 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 GGA1Q9UJY5 639 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 SYF2O95926 243 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 PYGBP11216 843 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 SLC5A9Q2M3M2 681 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 RASIP1Q5U651 963 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 TBC1D1Q86TI0 1168 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 CNGA4Q8IV77 575 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 GSPT2Q8IYD1 628 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 CORO1CQ9ULV4 474 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 TRIM75PA6NK02 468 aa15.9■□□□□ 0.14
SYNGAP1-203ENST00000428982 H0YIN7 160 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms