RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CPVLQ9H3G5 476 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 PRDM5Q9NQX1 630 aaPredicted RBP21.6■■□□□ 1.05
PSPC1-202ENST00000427943 ZSWIM5Q9P217 1185 aa21.6■■□□□ 1.05
PSPC1-202ENST00000427943 TNKSO95271 1327 aa21.59■■□□□ 1.05
PSPC1-202ENST00000427943 NFIBO00712 420 aa21.59■■□□□ 1.05
PSPC1-202ENST00000427943 DUSP11O75319 330 aaKnown RBP21.59■■□□□ 1.05
PSPC1-202ENST00000427943 CHMLP26374 656 aa21.59■■□□□ 1.05
PSPC1-202ENST00000427943 ENAHQ8N8S7 591 aaPredicted RBP21.59■■□□□ 1.05
PSPC1-202ENST00000427943 ZSCAN10Q96SZ4 725 aaPredicted RBP21.59■■□□□ 1.05
PSPC1-202ENST00000427943 KAT14Q9H8E8 782 aa21.59■■□□□ 1.05
PSPC1-202ENST00000427943 PRKAG2Q9UGJ0 569 aa21.59■■□□□ 1.05
PSPC1-202ENST00000427943 C6orf222P0C671 652 aaPredicted RBP21.58■■□□□ 1.05
PSPC1-202ENST00000427943 NT5C2P49902 561 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 CCDC178Q5BJE1 867 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 TDHQ8IZJ6 230 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 RUFY2Q8WXA3 655 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 LRCH3Q96II8 777 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 KRT23Q9C075 422 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 UBA5Q9GZZ9 404 aa21.58■■□□□ 1.05
PSPC1-202ENST00000427943 LAMA3Q16787 3333 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.57■■□□□ 1.04
PSPC1-202ENST00000427943 ASB14A6NK59 587 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 ACLYP53396 1101 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 PTH1RQ03431 593 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 GPATCH4Q5T3I0 446 aaKnown RBP21.57■■□□□ 1.04
PSPC1-202ENST00000427943 SLC30A10Q6XR72 485 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 EEPD1Q7L9B9 569 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 KLHDC9Q8NEP7 349 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 LBHD1Q9BQE6 289 aaPredicted RBP21.57■■□□□ 1.04
PSPC1-202ENST00000427943 CNNM2Q9H8M5 875 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 PDLIM7Q9NR12 457 aa21.57■■□□□ 1.04
PSPC1-202ENST00000427943 PTPDC1A2A3K4 754 aa21.56■■□□□ 1.04
PSPC1-202ENST00000427943 BAATQ14032 418 aaPredicted RBP21.56■■□□□ 1.04
PSPC1-202ENST00000427943 KCNA10Q16322 511 aa21.56■■□□□ 1.04
PSPC1-202ENST00000427943 CCSAPQ6IQ19 270 aaPredicted RBP21.56■■□□□ 1.04
PSPC1-202ENST00000427943 SH3RF1Q7Z6J0 888 aa21.56■■□□□ 1.04
PSPC1-202ENST00000427943 FBXO16Q8IX29 292 aaPredicted RBP21.56■■□□□ 1.04
PSPC1-202ENST00000427943 UBAC1Q9BSL1 405 aa21.56■■□□□ 1.04
PSPC1-202ENST00000427943 TSEN34Q9BSV6 310 aaKnown RBP21.56■■□□□ 1.04
PSPC1-202ENST00000427943 WDR19Q8NEZ3 1342 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 PTGS1P23219 599 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 TLE2Q04725 743 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 USH1GQ495M9 461 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 C1orf53Q5VUE5 145 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 CYB5R4Q7L1T6 521 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 CLEC4DQ8WXI8 215 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 ANKS1AQ92625 1134 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 UPF3AQ9H1J1 476 aaKnown RBP21.55■■□□□ 1.04
PSPC1-202ENST00000427943 STARD7Q9NQZ5 370 aa21.55■■□□□ 1.04
PSPC1-202ENST00000427943 MOXD2PA6NHM9 499 aa21.54■■□□□ 1.04
PSPC1-202ENST00000427943 PQBP1O60828 265 aaKnown RBP21.54■■□□□ 1.04
PSPC1-202ENST00000427943 CALML3P27482 149 aa21.54■■□□□ 1.04
PSPC1-202ENST00000427943 CST5P28325 142 aaPredicted RBP21.54■■□□□ 1.04
PSPC1-202ENST00000427943 ALDH5A1P51649 535 aaPredicted RBP21.54■■□□□ 1.04
PSPC1-202ENST00000427943 GJA9P57773 515 aa21.54■■□□□ 1.04
PSPC1-202ENST00000427943 TNFAIP2Q03169 654 aa21.54■■□□□ 1.04
PSPC1-202ENST00000427943 NOL8Q76FK4 1167 aaKnown RBP21.54■■□□□ 1.04
PSPC1-202ENST00000427943 SPC25Q9HBM1 224 aa21.54■■□□□ 1.04
PSPC1-202ENST00000427943 PDGFCQ9NRA1 345 aa21.54■■□□□ 1.04
PSPC1-202ENST00000427943 SGSM2O43147 1006 aa21.53■■□□□ 1.04
PSPC1-202ENST00000427943 CYP21A2P08686 494 aa21.53■■□□□ 1.04
PSPC1-202ENST00000427943 BEX3Q00994 111 aa21.53■■□□□ 1.04
PSPC1-202ENST00000427943 CDC37Q16543 378 aaPredicted RBP21.53■■□□□ 1.04
PSPC1-202ENST00000427943 ASPRV1Q53RT3 343 aa21.53■■□□□ 1.04
PSPC1-202ENST00000427943 IFIT1BQ5T764 474 aaKnown RBP21.53■■□□□ 1.04
PSPC1-202ENST00000427943 NUP133Q8WUM0 1156 aa21.53■■□□□ 1.04
PSPC1-202ENST00000427943 TAF6LQ9Y6J9 622 aa21.53■■□□□ 1.04
PSPC1-202ENST00000427943 TRIM43BA6NCK2 446 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 CTAGE5O15320 804 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 ASGR1P07306 291 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 SEC23AQ15436 765 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 GNASQ5JWF2 1037 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 RNF207Q6ZRF8 634 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 TLK2Q86UE8 772 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 ADGRF4Q8IZF3 695 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 BADQ92934 168 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 TRIM43Q96BQ3 446 aaPredicted RBP21.52■■□□□ 1.04
PSPC1-202ENST00000427943 ADD3Q9UEY8 706 aaKnown RBP21.52■■□□□ 1.04
PSPC1-202ENST00000427943 PNMA2Q9UL42 364 aa21.52■■□□□ 1.04
PSPC1-202ENST00000427943 KIAA1217Q5T5P2 1943 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 DHX16O60231 1041 aaKnown RBP21.51■■□□□ 1.03
PSPC1-202ENST00000427943 CLTBP09497 229 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 PARP1P09874 1014 aaKnown RBP21.51■■□□□ 1.03
PSPC1-202ENST00000427943 SMPD1P17405 629 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 RPS6P62753 249 aaKnown RBP21.51■■□□□ 1.03
PSPC1-202ENST00000427943 TRDNQ13061 729 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 LRIT3Q3SXY7 679 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 TMEM63BQ5T3F8 832 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 TAPT1Q6NXT6 567 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 PCSK9Q8NBP7 692 aaKnown RBP21.51■■□□□ 1.03
PSPC1-202ENST00000427943 MORC4Q8TE76 937 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 GLT1D1Q96MS3 346 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 VTA1Q9NP79 307 aa21.51■■□□□ 1.03
PSPC1-202ENST00000427943 GNEQ9Y223 722 aaKnown RBP21.51■■□□□ 1.03
PSPC1-202ENST00000427943 U3KPZ7 1027 aaPredicted RBP21.51■■□□□ 1.03
PSPC1-202ENST00000427943 BAZ2BQ9UIF8 2168 aaKnown RBP21.5■■□□□ 1.03
PSPC1-202ENST00000427943 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
PSPC1-202ENST00000427943 ITGB8P26012 769 aa21.49■■□□□ 1.03
PSPC1-202ENST00000427943 QRICH1Q2TAL8 776 aa21.49■■□□□ 1.03
PSPC1-202ENST00000427943 KIAA1211Q6ZU35 1233 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms