RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 FAM133AQ8N9E0 248 aa24.13■■□□□ 1.45
HSPG2-205ENST00000427897 ESYT1Q9BSJ8 1104 aa24.13■■□□□ 1.45
HSPG2-205ENST00000427897 SYN1P17600 705 aa24.12■■□□□ 1.45
HSPG2-205ENST00000427897 ADCYAP1R1P41586 468 aa24.12■■□□□ 1.45
HSPG2-205ENST00000427897 BAATQ14032 418 aaPredicted RBP24.12■■□□□ 1.45
HSPG2-205ENST00000427897 WTAPQ15007 396 aa24.12■■□□□ 1.45
HSPG2-205ENST00000427897 ADGRF4Q8IZF3 695 aa24.12■■□□□ 1.45
HSPG2-205ENST00000427897 FERMT2Q96AC1 680 aa24.12■■□□□ 1.45
HSPG2-205ENST00000427897 MPHOSPH6Q99547 160 aaKnown RBP24.12■■□□□ 1.45
HSPG2-205ENST00000427897 ANO2Q9NQ90 1003 aa24.12■■□□□ 1.45
HSPG2-205ENST00000427897 SOWAHBA6NEL2 793 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 CALML3P27482 149 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 CCDC144BQ3MJ40 725 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 RNF207Q6ZRF8 634 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 SKAP1Q86WV1 359 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 CPVLQ9H3G5 476 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 PRKAG2Q9UGJ0 569 aa24.11■■□□□ 1.45
HSPG2-205ENST00000427897 WDR19Q8NEZ3 1342 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 ALPK3Q96L96 1907 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 SMCHD1A6NHR9 2005 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 NFIBO00712 420 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 SEC23AQ15436 765 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 CDC37Q16543 378 aaPredicted RBP24.1■■□□□ 1.45
HSPG2-205ENST00000427897 TMEM67Q5HYA8 995 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 CHST3Q7LGC8 479 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 ATP11BQ9Y2G3 1177 aa24.1■■□□□ 1.45
HSPG2-205ENST00000427897 DUSP11O75319 330 aaKnown RBP24.09■■□□□ 1.45
HSPG2-205ENST00000427897 SLC39A5Q6ZMH5 540 aa24.09■■□□□ 1.45
HSPG2-205ENST00000427897 LENG1Q96BZ8 264 aaPredicted RBP24.09■■□□□ 1.45
HSPG2-205ENST00000427897 FGD4Q96M96 766 aa24.09■■□□□ 1.45
HSPG2-205ENST00000427897 B4DLN1 442 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 KLRF2D3W0D1 207 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 C6orf222P0C671 652 aaPredicted RBP24.08■■□□□ 1.45
HSPG2-205ENST00000427897 MRPL12P52815 198 aaKnown RBP24.08■■□□□ 1.45
HSPG2-205ENST00000427897 TNFAIP2Q03169 654 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 EEPD1Q7L9B9 569 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 CATIPQ7Z7H3 387 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 FBXO11Q86XK2 927 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 VTI1AQ96AJ9 217 aa24.08■■□□□ 1.45
HSPG2-205ENST00000427897 RBM27Q9P2N5 1060 aaKnown RBP24.08■■□□□ 1.45
HSPG2-205ENST00000427897 RTP1P59025 263 aa24.07■■□□□ 1.44
HSPG2-205ENST00000427897 RNF20Q5VTR2 975 aa24.07■■□□□ 1.44
HSPG2-205ENST00000427897 NUP133Q8WUM0 1156 aa24.07■■□□□ 1.44
HSPG2-205ENST00000427897 TSEN34Q9BSV6 310 aaKnown RBP24.07■■□□□ 1.44
HSPG2-205ENST00000427897 LSG1Q9H089 658 aaKnown RBP24.07■■□□□ 1.44
HSPG2-205ENST00000427897 ABCB11O95342 1321 aa24.07■■□□□ 1.44
HSPG2-205ENST00000427897 SYNRGQ9UMZ2 1314 aa24.07■■□□□ 1.44
HSPG2-205ENST00000427897 MCM3APO60318 1980 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 NFXL1Q6ZNB6 911 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 MCF2L2Q86YR7 1114 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 PCSK9Q8NBP7 692 aaKnown RBP24.06■■□□□ 1.44
HSPG2-205ENST00000427897 CLEC4DQ8WXI8 215 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 PURBQ96QR8 312 aaKnown RBP24.06■■□□□ 1.44
HSPG2-205ENST00000427897 LBHD1Q9BQE6 289 aaPredicted RBP24.06■■□□□ 1.44
HSPG2-205ENST00000427897 AP5M1Q9H0R1 490 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 PHF24Q9UPV7 400 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 MRPL11Q9Y3B7 192 aaKnown RBP24.06■■□□□ 1.44
HSPG2-205ENST00000427897 TAF6LQ9Y6J9 622 aa24.06■■□□□ 1.44
HSPG2-205ENST00000427897 SLC27A2O14975 620 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 CDC45O75419 566 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 ALDH5A1P51649 535 aaPredicted RBP24.05■■□□□ 1.44
HSPG2-205ENST00000427897 RPS6P62753 249 aaKnown RBP24.05■■□□□ 1.44
HSPG2-205ENST00000427897 PDE4DQ08499 809 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 GNASQ5JWF2 1037 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 SLC30A10Q6XR72 485 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 STOX1Q6ZVD7 989 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 STAG2Q8N3U4 1231 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 JMJD4Q9H9V9 463 aa24.05■■□□□ 1.44
HSPG2-205ENST00000427897 MCM5P33992 734 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 KCNA10Q16322 511 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 QRICH1Q2TAL8 776 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 CREB3L3Q68CJ9 461 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 IQSEC1Q6DN90 963 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 AMNQ9BXJ7 453 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 VTA1Q9NP79 307 aa24.04■■□□□ 1.44
HSPG2-205ENST00000427897 PRDM5Q9NQX1 630 aaPredicted RBP24.04■■□□□ 1.44
HSPG2-205ENST00000427897 LOC102724159A0A0B4J2E5 919 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 A0A1W2PQ45 241 aaPredicted RBP24.03■■□□□ 1.44
HSPG2-205ENST00000427897 A0A1W2PQY0 241 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 MOXD2PA6NHM9 499 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 PRC1O43663 620 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 ADAMTS4O75173 837 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 ACLYP53396 1101 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 TRAF1Q13077 416 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 PWP2Q15269 919 aaKnown RBP24.03■■□□□ 1.44
HSPG2-205ENST00000427897 FBXO16Q8IX29 292 aaPredicted RBP24.03■■□□□ 1.44
HSPG2-205ENST00000427897 TMTC2Q8N394 836 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 RGS22Q8NE09 1264 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 DNERQ8NFT8 737 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 GLT1D1Q96MS3 346 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 STARD7Q9NQZ5 370 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 MAD2L2Q9UI95 211 aa24.03■■□□□ 1.44
HSPG2-205ENST00000427897 MYH6P13533 1939 aa24.02■■□□□ 1.44
HSPG2-205ENST00000427897 CCDC69A6NI79 296 aa24.02■■□□□ 1.44
HSPG2-205ENST00000427897 GJA9P57773 515 aa24.02■■□□□ 1.44
HSPG2-205ENST00000427897 GRM4Q14833 912 aa24.02■■□□□ 1.44
HSPG2-205ENST00000427897 TRIM60Q495X7 471 aa24.02■■□□□ 1.44
HSPG2-205ENST00000427897 HOMER1Q86YM7 354 aa24.02■■□□□ 1.44
HSPG2-205ENST00000427897 MB21D2Q8IYB1 491 aaPredicted RBP24.02■■□□□ 1.44
HSPG2-205ENST00000427897 KATNBL1Q9H079 304 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms