RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 TMTC2Q8N394 836 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 RANBP17Q9H2T7 1088 aaKnown RBP18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 KLRF2D3W0D1 207 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 APOBRQ0VD83 1088 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 APOA5Q6Q788 366 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 BRF1Q92994 677 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 TM6SF1Q9BZW5 370 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 CRISPLD2Q9H0B8 497 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 SLC12A7Q9Y666 1083 aa18.26■□□□□ 0.51
CLK3P2-201ENST00000427566 BRCA2P51587 3418 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 CYTH3O43739 400 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 ICAM1P05362 532 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 TKFCQ3LXA3 575 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 MICU3Q86XE3 530 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 CMTR1Q8N1G2 835 aaKnown RBP18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 TRPV1Q8NER1 839 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 LARP6Q9BRS8 491 aaKnown RBP18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 TINF2Q9BSI4 451 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 JMJD4Q9H9V9 463 aa18.25■□□□□ 0.51
CLK3P2-201ENST00000427566 LCTP09848 1927 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 KLF18A0A0U1RQI7 1052 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 DDAH1O94760 285 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 CYBAP13498 195 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 ANAPC15P60006 121 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 FGD1P98174 961 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 MUM1L1Q5H9M0 696 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 NSMFQ6X4W1 530 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 DPF3Q92784 378 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 PAWRQ96IZ0 340 aaKnown RBP18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 AGXT2Q9BYV1 514 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 DDX20Q9UHI6 824 aaKnown RBP18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 CYP46A1Q9Y6A2 500 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 BAZ2BQ9UIF8 2168 aaKnown RBP18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 PDE4DIPQ5VU43 2346 aa18.24■□□□□ 0.51
CLK3P2-201ENST00000427566 POTEB2H3BUK9 544 aa18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 PLEKHA8P1O95397 391 aa18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 USH1GQ495M9 461 aa18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 ALPK3Q96L96 1907 aa18.23■□□□□ 0.51
CLK3P2-201ENST00000427566 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 CAPN2P17655 700 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 CNTN2Q02246 1040 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 FBXL16Q8N461 479 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 FANCBQ8NB91 859 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 CTCFLQ8NI51 663 aaPredicted RBP18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 MAP3K14Q99558 947 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 OGDHLQ9ULD0 1010 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 NAP1L2Q9ULW6 460 aaPredicted RBP18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 CNPY2Q9Y2B0 182 aa18.22■□□□□ 0.51
CLK3P2-201ENST00000427566 MSCO60682 206 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 QRICH1Q2TAL8 776 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 LHX8Q68G74 356 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 NECAB2Q7Z6G3 386 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 SRBD1Q8N5C6 995 aaKnown RBP18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 ANKLE1Q8NAG6 615 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 MTMR8Q96EF0 704 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 KIF2CQ99661 725 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 HTATIP2Q9BUP3 242 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 FAM217BQ9NTX9 383 aaPredicted RBP18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 PFASO15067 1338 aa18.21■□□□□ 0.51
CLK3P2-201ENST00000427566 PTPDC1A2A3K4 754 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 SEPT4O43236 478 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 ZBTB43O43298 467 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 IGHA2P01877 340 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 CDC27P30260 824 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 HOMER1Q86YM7 354 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 PIGSQ96S52 555 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 C22orf23Q9BZE7 217 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 NFIBO00712 420 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 CALM1P0DP23 149 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 CALM2P0DP24 149 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 CALM3P0DP25 149 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 KIF5BP33176 963 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 SYNE3Q6ZMZ3 975 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
CLK3P2-201ENST00000427566 GOLGA8AA7E2F4 631 aa18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 CALML3P27482 149 aa18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 BAATQ14032 418 aaPredicted RBP18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 TMTC3Q6ZXV5 915 aa18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 UBE2Q1Q7Z7E8 422 aa18.19■□□□□ 0.5
CLK3P2-201ENST00000427566 C11orf49Q9H6J7 331 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms