RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TLR3O15455 904 aaKnown RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 SNX1Q13596 522 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 CSRNP2Q9H175 543 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 MAD1L1Q9Y6D9 718 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 SAMD9Q5K651 1589 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 CD58P19256 250 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 XPAP23025 273 aaPredicted RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 LACTBP83111 547 aaPredicted RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 ARMC9Q7Z3E5 817 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 FAM178BQ8IXR5 827 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 USP44Q9H0E7 712 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 NXF1Q9UBU9 619 aaKnown RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 MKRN1Q9UHC7 482 aaKnown RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 CDC25AP30304 524 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 MAGEA1P43355 309 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 RSRC2Q7L4I2 434 aaKnown RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 PRPF31Q8WWY3 499 aaKnown RBP14.47□□□□□ -0.09
SPG11-202ENST00000427534 MTRQ99707 1265 aa14.47□□□□□ -0.09
SPG11-202ENST00000427534 ZBBXA8MT70 800 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 CUTAO60888 179 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 SLC10A4Q96EP9 437 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 KRT12Q99456 494 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 GSTA1P08263 222 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 GSTA2P09210 222 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 TTC19Q6DKK2 380 aaPredicted RBP14.46□□□□□ -0.09
SPG11-202ENST00000427534 ANTXR1Q9H6X2 564 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 SSH3Q8TE77 659 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 STMN2Q93045 179 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 CLIC4Q9Y696 253 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 GOLGA8SH3BPF8 625 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 NOL3O60936 208 aaKnown RBP14.46□□□□□ -0.09
SPG11-202ENST00000427534 USP17L2Q6R6M4 530 aa14.46□□□□□ -0.09
SPG11-202ENST00000427534 ZNF335Q9H4Z2 1342 aaPredicted RBP14.46□□□□□ -0.1
SPG11-202ENST00000427534 ERVV-2B6SEH9 535 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 SASH1O94885 1247 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.46□□□□□ -0.1
SPG11-202ENST00000427534 CDC26Q8NHZ8 85 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 CNKSR1Q969H4 720 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 NLRP4Q96MN2 994 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 FAM184BQ9ULE4 1060 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 STK38LQ9Y2H1 464 aa14.46□□□□□ -0.1
SPG11-202ENST00000427534 KCNK3O14649 394 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 THAP12O43422 761 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 NFX1Q12986 1120 aaKnown RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 AOC3Q16853 763 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 DSCC1Q9BVC3 393 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 MAGI3Q5TCQ9 1506 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 GOLGA8IPA6NC78 632 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 USP17L3A6NCW0 530 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 USP17L4A6NCW7 530 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 GOLGA8JA6NMD2 632 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 SFI1A8K8P3 1242 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 LRRN2O75325 713 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 NLRP12P59046 1061 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 LRCH2Q5VUJ6 765 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 USP17L1Q7RTZ2 530 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 FAM149B1Q96BN6 582 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 RAB20Q9NX57 234 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 GSPT1P15170 499 aaKnown RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 ANO4Q32M45 955 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 CACYBPQ9HB71 228 aaKnown RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 SSTR3P32745 418 aaPredicted RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 FYB2Q5VWT5 728 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 PBRM1Q86U86 1689 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 PPP1R2P41236 205 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 TFAMQ00059 246 aaKnown RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 EN1Q05925 392 aaPredicted RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 VWA3BQ502W6 1294 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 RSPH3Q86UC2 560 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 GRAMD1CQ8IYS0 662 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 ZSCAN20P17040 1043 aaPredicted RBP14.45□□□□□ -0.1
SPG11-202ENST00000427534 RPS6KA2Q15349 733 aa14.45□□□□□ -0.1
SPG11-202ENST00000427534 SNAP23O00161 211 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 TM6SF1Q9BZW5 370 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 ZNF277Q9NRM2 450 aaPredicted RBP14.44□□□□□ -0.1
SPG11-202ENST00000427534 ZNF772Q68DY9 489 aaPredicted RBP14.44□□□□□ -0.1
SPG11-202ENST00000427534 HNRNPDLO14979 420 aaKnown RBP14.44□□□□□ -0.1
SPG11-202ENST00000427534 FGAP02671 866 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 ADCY8P40145 1251 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 RFX6Q8HWS3 928 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 C10orf67Q8IYJ2 551 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 PIGSQ96S52 555 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 C1orf112Q9NSG2 853 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 ZNF341Q9BYN7 854 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 PPP1R12CQ9BZL4 782 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 SYNDIG1LA6NDD5 238 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 MMP10P09238 476 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 MORC3Q14149 939 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 NUCKS1Q9H1E3 243 aaKnown RBP14.44□□□□□ -0.1
SPG11-202ENST00000427534 SPATA31E1Q6ZUB1 1445 aa14.44□□□□□ -0.1
SPG11-202ENST00000427534 BTBD18B2RXH4 712 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 KCNJ18B7U540 433 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 H7C0C1 242 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 EIF2AK2P19525 551 aaKnown RBP14.43□□□□□ -0.1
SPG11-202ENST00000427534 ATP5OP48047 213 aa14.43□□□□□ -0.1
SPG11-202ENST00000427534 PDE6CP51160 858 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms