RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.86	□□□□□ -0.19
HDLBP-215	ENST00000427487	CCPG1	Q9ULG6	757 aa		13.86	□□□□□ -0.19
HDLBP-215	ENST00000427487	PCDHA4	Q9UN74	947 aa		13.86	□□□□□ -0.19
HDLBP-215	ENST00000427487	MTMR6	Q9Y217	621 aa		13.86	□□□□□ -0.19
HDLBP-215	ENST00000427487	ADGRA2	Q96PE1	1338 aa		13.86	□□□□□ -0.19
HDLBP-215	ENST00000427487	COL11A1	P12107	1806 aa	Predicted RBP	13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	hCG_1642624	A0A1W2PR95	340 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	CA12	O43570	354 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	NLRP5	P59047	1200 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	C1QTNF8	P60827	252 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	KIF23	Q02241	960 aa	Predicted RBP	13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	MKRN3	Q13064	507 aa	Known RBP	13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	NPY5R	Q15761	445 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	TYW1B	Q6NUM6	668 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	BRAP	Q7Z569	592 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	SPRYD3	Q8NCJ5	442 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	CUL5	Q93034	780 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	AIFM3	Q96NN9	605 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	ZFYVE28	Q9HCC9	887 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	RBPJL	Q9UBG7	517 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	ATP6V1D	Q9Y5K8	247 aa		13.85	□□□□□ -0.19
HDLBP-215	ENST00000427487	SMCO2	A6NFE2	343 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487		M0R2N6	131 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	TLR2	O60603	784 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	CNMD	O75829	334 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	FOS	P01100	380 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	ZSCAN22	P10073	491 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	KRT2	P35908	639 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	CLK2	P49760	499 aa	Known RBP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	ADCY7	P51828	1080 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	ERVK-9	P63128	1117 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	ERVK-24	P63145	666 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	AP3B2	Q13367	1082 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	ATL3	Q6DD88	541 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	SNRNP48	Q6IEG0	339 aa	Known RBP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	CCDC174	Q6PII3	467 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	POTEE	Q6S8J3	1075 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	BLID	Q8IZY5	108 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	GPRC5A	Q8NFJ5	357 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	COA7	Q96BR5	231 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	SHISA4	Q96DD7	197 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	MROH8	Q9H579	483 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	PSTPIP2	Q9H939	334 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	RAVER2	Q9HCJ3	691 aa	Known RBP	13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	BTBD7	Q9P203	1132 aa		13.84	□□□□□ -0.19
HDLBP-215	ENST00000427487	PPFIA3	O75145	1194 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	CYP2C8	P10632	490 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	BCR	P11274	1271 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	HSD17B4	P51659	736 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	TAF1C	Q15572	869 aa	Predicted RBP	13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	NOM1	Q5C9Z4	860 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	DIS3L2	Q8IYB7	885 aa	Known RBP	13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	ABRA	Q8N0Z2	381 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	CPXCR1	Q8N123	301 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	CLEC4D	Q8WXI8	215 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	PIBF1	Q8WXW3	757 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	TNFRSF25	Q93038	417 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	AGBL1	Q96MI9	1066 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	TRERF1	Q96PN7	1200 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	ACAD9	Q9H845	621 aa		13.83	□□□□□ -0.2
HDLBP-215	ENST00000427487	LOC102724159	A0A0B4J2E5	919 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	VPS37C	A5D8V6	355 aa	Predicted RBP	13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	OPLAH	O14841	1288 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	STRN	O43815	780 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	TRAPPC10	P48553	1259 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	VEGFB	P49765	207 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	PWP2	Q15269	919 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	USH1G	Q495M9	461 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	C17orf99	Q6UX52	265 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	KRT25	Q7Z3Z0	450 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	NOSTRIN	Q8IVI9	506 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	REXO1	Q8N1G1	1221 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	TXNRD2	Q9NNW7	524 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	RNF146	Q9NTX7	359 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	SAGE1	Q9NXZ1	904 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	KCNJ14	Q9UNX9	436 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	PFAS	O15067	1338 aa		13.82	□□□□□ -0.2
HDLBP-215	ENST00000427487	SMCHD1	A6NHR9	2005 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	MEIS2	O14770	477 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	F13A1	P00488	732 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	POLR2M	P0CAP2	368 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	ALAS1	P13196	640 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	MAPK4	P31152	587 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	SNAP25	P60880	206 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	ORC2	Q13416	577 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	ZDHHC9	Q9Y397	364 aa		13.81	□□□□□ -0.2
HDLBP-215	ENST00000427487	BTBD18	B2RXH4	712 aa		13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	REST	Q13127	1097 aa		13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	GNL2	Q13823	731 aa	Known RBP	13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	RILPL1	Q5EBL4	403 aa		13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	CLEC17A	Q6ZS10	378 aa		13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	ZIC5	Q96T25	663 aa		13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	PAGR1	Q9BTK6	254 aa		13.8	□□□□□ -0.2
HDLBP-215	ENST00000427487	EHMT1	Q9H9B1	1298 aa		13.8	□□□□□ -0.2

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